Gene detail information of Glyur002185s00036362 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G07300.1 | 7.00E-08 | Calcium-dependent phospholipid-binding Copine family protein |
| NR | XP_003532331.1 | 4.17E-18 | PREDICTED: protein BONZAI 1-like [Glycine max] |
| Swissprot | tr|Q5S1W2|BON2_ARATH | 7.00E-09 | Protein BONZAI 2 |
| trEMBL | tr|I1KP22|I1KP22_SOYBN | 2.00E-18 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G01020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02185 | 36082 | 36464 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.470 |
| SRR1783600 | control | 6.997 |
| SRR1783602 | moderate drought stress | 7.648 |
| SRR1811619 | moderate drought stress | 6.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.064 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.259 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.653 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.965 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.737 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.375 |
| SRR9715740 | Leaf | 3.098 |
| SRR9715741 | Leaf | 10.036 |
| SRR9715739 | Root | 1.377 |
| SRR9715742 | Root | 5.798 |
| SRR9715743 | Root | 4.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.630 |
| SRR8400027 | Control - Root | 14.074 |