Gene detail information of Glyur002183s00035947 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13980.1 | 4.00E-10 | |
| NR | XP_003541297.2 | 1.70E-81 | PREDICTED: uncharacterized protein LOC100779754 [Glycine max] |
| trEMBL | tr|I1LY37|I1LY37_SOYBN | 6.00E-82 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G16810.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02183 | 45131 | 46255 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.475 |
| SRR1783600 | control | 5.805 |
| SRR1783602 | moderate drought stress | 1.367 |
| SRR1811619 | moderate drought stress | 1.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.050 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.950 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.147 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.433 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.082 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.760 |
| SRR2868004 | Drought Stress (root) | 0.757 |
| SRR2967015 | Control (root) | 1.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.049 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.425 |
| SRR9715742 | Root | 0.440 |
| SRR9715743 | Root | 0.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.516 |
| SRR8400027 | Control - Root | 5.043 |