Gene detail information of Glyur002177s00034178.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40740.1 | 1.00E-36 | WRKY DNA-binding protein 55 |
| NR | XP_006578844.1 | 8.43E-97 | PREDICTED: WRKY transcription factor 55-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9SHB5|WRK55_ARATH | 3.00E-46 | WRKY transcription factor 55 |
| trEMBL | tr|K7KLN8|K7KLN8_SOYBN | 2.00E-95 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G40121.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02177 | 35059 | 38219 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002177s00034178.1 | PF03106.10 | WRKY | 162 | 217 | 7.70E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.289 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.053 |
| SRR2868004 | Drought Stress (root) | 0.285 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 72.003 |
| SRR9715740 | Leaf | 10.604 |
| SRR9715741 | Leaf | 107.125 |
| SRR9715739 | Root | 0.491 |
| SRR9715742 | Root | 1.107 |
| SRR9715743 | Root | 0.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 1.630 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.021 |
| SRR8400027 | Control - Root | 0.032 |