Gene detail information of Glyur002176s00039633 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004514719.1 | 8.37E-08 | PREDICTED: thioredoxin-like 3-2, chloroplastic-like isoform X3 [Cicer arietinum] |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02176 | 22769 | 24110 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 76.026 |
| SRR1783600 | control | 75.955 |
| SRR1783602 | moderate drought stress | 65.964 |
| SRR1811619 | moderate drought stress | 65.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.047 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.388 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.218 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.114 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.966 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.310 |
| SRR9715740 | Leaf | 9.869 |
| SRR9715741 | Leaf | 16.835 |
| SRR9715739 | Root | 10.326 |
| SRR9715742 | Root | 10.271 |
| SRR9715743 | Root | 12.632 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.034 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.148 |
| SRR8400027 | Control - Root | 32.466 |