Gene detail information of Glyur002176s00039631 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04260.1 | 7.00E-10 | WCRKC thioredoxin 2 |
| NR | XP_004514718.1 | 4.03E-14 | PREDICTED: thioredoxin-like 3-2, chloroplastic-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q8VZT6|TRL32_ARATH | 1.00E-11 | Thioredoxin-like 3-2, chloroplastic (Precursor) |
| trEMBL | tr|C6T385|C6T385_SOYBN | 4.00E-14 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU16123.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02176 | 7021 | 19618 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.882 |
| SRR1783600 | control | 5.712 |
| SRR1783602 | moderate drought stress | 5.021 |
| SRR1811619 | moderate drought stress | 5.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.423 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.566 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.674 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.112 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.218 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.140 |
| SRR9715740 | Leaf | 4.041 |
| SRR9715741 | Leaf | 6.198 |
| SRR9715739 | Root | 3.382 |
| SRR9715742 | Root | 4.026 |
| SRR9715743 | Root | 3.528 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.177 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.058 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.199 |
| SRR8400027 | Control - Root | 11.890 |