Gene detail information of Glyur002172s00044459 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G51740.1 | 4.00E-13 | syntaxin of plants 81 |
| NR | KEH27041.1 | 2.12E-20 | syntaxin-81 protein [Medicago truncatula] |
| Swissprot | tr|P59277|SYP81_ARATH | 2.00E-15 | Syntaxin-81 |
| trEMBL | tr|A0A072UC59|A0A072UC59_MEDTR | 8.00E-21 | Syntaxin-81 protein {ECO:0000313|EMBL:KEH27041.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02172 | 41923 | 44148 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.382 |
| SRR1783600 | control | 0.325 |
| SRR1783602 | moderate drought stress | 0.340 |
| SRR1811619 | moderate drought stress | 0.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.019 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.918 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.907 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.852 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.785 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.145 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.723 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.744 |
| SRR2868004 | Drought Stress (root) | 2.971 |
| SRR2967015 | Control (root) | 3.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.557 |
| SRR9715740 | Leaf | 2.804 |
| SRR9715741 | Leaf | 0.240 |
| SRR9715739 | Root | 1.239 |
| SRR9715742 | Root | 0.581 |
| SRR9715743 | Root | 1.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.924 |
| SRR8400027 | Control - Root | 4.664 |