Gene detail

Gene detail information of Glyur002165s00032072

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT4G21270.1	kinesin 1
NR	XP_003545783.1	PREDICTED: kinesin-1-like [Glycine max]
Swissprot	tr\|Q07970\|ATK1_ARATH	Kinesin-1
trEMBL	tr\|I1ME60\|I1ME60_SOYBN	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur002165s00032072.1
ACCGCTCTCTTAAAATTCAAATTTCACAACGCTCTTCCGAACGGGCGAACACTTCACACACCCACAACTGCAAACCCTAGCATCGTTCCCAATCGACCTAAGCAGATTCATTCTGCAAAGCCTCACATGGCTTCCCGGAACCAGAACAGGCCACCGCGCAGCCCCTCCAACAAAAAGGGAGGTTGTGAGGAAGTTCCCTCAGACAAGCGACGAAGGACGGGAGCAGAAAGAATGGAGCGACAGGGCCGAGCCAGGGTTCCATTTGGTGCACTCAACACCAACAAAGCAGAAGCCAACGATGCTGGTGGCCCCGAGGGATCCGAATGCAGCNCTGTTGATTTCACCAAAGAGGACGTAGAGGCATTGCTGAATGAGAAGATGAAAAAGGGNAATCCCTTTGATAATAAGAAAAAGATGGACCAGATGGCAGATCTCATTAAGCGACTTAAGCTTTGCCTTCGATGGTTTAAGAGAGTTGAAGAAGGCTACATCCAAGGAAAAGAAAAGCTTCAGACTGATCTAGAATCTGCTGAGAAGAAATGTATTGATACTGAGAATGAGATGAAACTGAAGATGGCGGAATTGAATGAGGTTATATCTAATTTGAGGATGACAATTTCCTCTTTGGAAGAGAGGATTACAAAGGAAGAATCAGATAAATTGGAAGCTATTGATTGTTATAGAAAAGAAAAAGAAGCCAGAAATGCAGCTGAGCAGATGCAAGCTTCTCTTTCAACTGAACTTGAGAAAGTTCGTGTTGAGAAATCAACTGCTGAGCGGAAGGCCATTGCAAATGATGACCTGAACAAGCGATCACAGGAGTATAATATGAGTCTGCAGCAGTACAATAGTCGTCTTCAGTCAGATCTTGAAGAAACGAGTAAGGCACATAAAGATCTGGAAACCGAGAAAGCATCTATTCTTCGTGACCTCAGNAAAGTAAGAGGCTACCATGAGGCATTGCAACAAGAGTTGGCATCTCTTAAAATGGCTGATTTATCTGCTTCAGCAACAAGAACAGTGTTTGAAGAACTACATGAGCGACTAGCAGATCAGAAAAGAGTTATACGTGAACTAGAACGCCAAGTAGTTGGAGGAGAGGAGTTAAGGAAAAAACTGCACAACACTATCCTGGAGTTAAAAGGAAATATTCGCGTGTTCTGCCGTGTCCGGCCTTTGCTGCCAGATGATGGTCCTTCAGCAGACATGGTAGTTTCTTACCCTACATCATCAACAGATGCTCTTGGCAGGGGCATTGATTTGTTACAGAGCGGGCAGAAGTATCCTTTTACATTTGATAAGGTATTTAATCACGAGGCTTCTCAGGAAGAAGTTTTCACAGAGATATCACAGCTGGTACAAAGCGCGCTTGATGGGTACAAGGTTTGTATCTTTGCTTATGGACAGACAGGTTCAGGCAAAACCTACACAATGATGGGTAGGCCTGATGCCCCAGAGCTGAAAGGATTGATACCACGTTCTCTAGAACAGATATTCCAGATTAGTCAGTCCCTGAAAGATCAGGGGTGGAAGTACAAAATGCAGGCGTCAATACTGGAAATATACAATGAGACCATCAGGGATTTGTTATCACCGAATCGGTCGAGTGGTATTGATGTAACACGAACGGATAATGGTGCTCCTGGAAAGCAGTACACTATCAAACACGATGCCAATGGAAACACATACGTTTCAGACCTGANTATTGTGGATGTTTGCAGTGTAAATGAGATTTCCTCCCTCCTGCAACAGGCTGCGCAAAGCAGGTCAGTAGGAAGAACACAGATGAATGAACAGTCATCACGAAGTCACTTTGTCTTTACTTTGCGTATATGTGGTTTTAATGAGAAGACTGAACAACAGGTGCAAGGTGTGTTAAACCTGATTGATCTGGCTGGAAGTGAAAGGCTGTCTAGAAGTGGAGCAACTGGGGACCGTTTGAAGGAAACTCAGGCTATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATTTTTGCTTTGGCAAAGAAAGAGGAGCACGTCCCATTTAGGAATTCAAAACTGACATACCTTCTCCAGCCATGTCTTGGTGGAGATTCCAAAACTTTGATGTTTGTCAACATCTCACCTGACCCATCTTCAACAGGAGAGTCACTTTGCTCTCTTCGTTTTGCTGCCAGAGTCAATGCTTGTGAGATTGGTATTCCT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02165	40662	47173	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002165s00032072.1	PF00225.18	Kinesin	389	722	6.20E-106

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.809
SRR1783600	control	4.804
SRR1783602	moderate drought stress	3.084
SRR1811619	moderate drought stress	2.897

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.340
DRR006520	Root Summer glycyrrhizin high producing strain	7.863
DRR006521	Root Winter glycyrrhizin high producing strain	0.229
DRR006522	Root Winter glycyrrhizin high producing strain	0.246
DRR006523	Root Summer glycyrrhizin low producing strain	3.167
DRR006524	Root Summer glycyrrhizin low producing strain	2.791
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.802
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.902

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.744
SRR2868004	Drought Stress (root)	9.590
SRR2967015	Control (root)	10.398

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.105
SRR9715740	Leaf	0.207
SRR9715741	Leaf	0.603
SRR9715739	Root	0.454
SRR9715742	Root	1.200
SRR9715743	Root	1.270

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	18.881
SRR8749028	MeJA induced 9h	18.158
SRR8749029	MeJA induced 9h	8.792
SRR8749030	Uninduced	0.730
SRR8749031	Uninduced	0.392
SRR8749032	Uninduced	1.471

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	16.363
SRR8400027	Control - Root	10.690