Gene detail

Gene detail information of Glyur002165s00032064

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G49290.1	6.00E-22	receptor like protein 56
NR	KEH36653.1	1.18E-91	LRR receptor-like kinase [Medicago truncatula]
COG	YP_007319008.1	2.00E-10	hypothetical protein FAES_0403 [Fibrella aestuarina BUZ 2]
Swissprot	tr\|Q8GUQ5\|BRI1_SOLLC	2.00E-17	Brassinosteroid LRR receptor kinase (Precursor)
trEMBL	tr\|A0A072V5L9\|A0A072V5L9_MEDTR	4.00E-92	LRR receptor-like kinase {ECO:0000313\|EMBL:KEH36653.1}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02165	8903	9945	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002165s00032064.1	PF12799.2	LRR_4	31	63	4.70E-07

Expression pattern

SRA Experiment	Description	TPM
SRR1783599	control	0.403
SRR1783600	control	0.160
SRR1783602	moderate drought stress	0.168
SRR1811619	moderate drought stress	0.420

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.385
DRR006520	Root Summer glycyrrhizin high producing strain	0.504
DRR006521	Root Winter glycyrrhizin high producing strain	0.723
DRR006522	Root Winter glycyrrhizin high producing strain	0.679
DRR006523	Root Summer glycyrrhizin low producing strain	0.871
DRR006524	Root Summer glycyrrhizin low producing strain	0.787
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.292
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.138

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.220
SRR2868004	Drought Stress (root)	3.127
SRR2967015	Control (root)	2.246

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.105
SRR9715740	Leaf	0.645
SRR9715741	Leaf	0.404
SRR9715739	Root	2.693
SRR9715742	Root	2.319
SRR9715743	Root	1.241

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.031
SRR8749028	MeJA induced 9h	1.364
SRR8749029	MeJA induced 9h	0.516
SRR8749030	Uninduced	1.967
SRR8749031	Uninduced	0.650
SRR8749032	Uninduced	0.624

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.065
SRR8400027	Control - Root	0.828