Gene detail

Gene detail information of Glyur002161s00032827

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G53920.1	2.00E-104	GDSL-motif lipase 5
NR	KHN01459.1	0	GDSL esterase/lipase 5 [Glycine soja]
COG	YP_007143513.1	5.00E-13	G-D-S-L family lipolytic protein [Crinalium epipsammum PCC 9333]
Swissprot	tr\|Q9SSA7\|GLIP5_ARATH	6.00E-120	GDSL esterase/lipase 5 (Precursor)
trEMBL	tr\|G7L940\|G7L940_MEDTR	0	GDSL-like lipase/acylhydrolase {ECO:0000313\|EMBL:AET01894.1}

Sequence

Transcript Sequence

>Glyur002161s00032827.1
CGCGTTGACCAGTCCAAAAACTAATAAACATATATAGAAACTAAGTCATCACTACATATATGTGTGGCCATGTGGGTCAGCTATGGTCTATTATTTGAGATATTGAAGCTGATTCTGTGAGGATGAAGAAGTTCATCGTGTTCTTCCTCGTGTTCCTTATAGCTCTTGTTTCTCAGACCCGTGGAAGCAAGACCAAGCACAACATTGCCCTGTTCATTTTTGGAGATTCTTTCTTAGATGCAGGGAATAACAATTACATCAACACTACAACCCTTGACCAAGCAAATTTCTTGCCTTATGGGGAAACCTACTTCAAGTTNCCAACTGGGAGATTCTCTGATGGCCGTTTGGTATCAGATTTTATTGCTGAATATGCAAATCTGCCATTGGTTCCACCATTTCTACAACCTGGATTTACCCAATACTATAGTGGAGTGAATTTTGCGTCNGGTGGAGCAGGTGCGCTTGTTGAAACCTTTGGAGGGTCGGTAATACCCTTCAAAACACAAGCAAGAAACTTCAAGAAAGTAACGGCTTGGTTGAGGCACAAGTTAGGCAGTTCTGAAGCCAAAACATTGCTATCAAACTCTGTCTACATGTTTAGCATCGGGTCTAATGATTATCTTAGCCCCTTGTTCACACATTCTGGTGTTCTCAACTCTTATTCTCATTCAGAATATGTTGGCATGGTTGTTGGTAACTTGACTTCCATTCTCAAGGAAATACATAAAAGAGGGGCTAGAAAATTTGCGTTCTTGAACTTACCACCCTTGGGTTGTCTTCCAGCAACCAGAATAATTCATTCAGAAGGAAATGGTAGCTGCTTAGAAGAACTTACATTACTTGCAAATTTACACAATCAAGCTCTATCTGTGGTTCTCTTACAATTGGAGAAGCAACTAAGGGGCTTTAAATTTTCTCTCTATGATGAAGGAAAATCAGCATGCTGTGGAAGTGGACCATTTAGAGGAGAATACAGCTGTGGAGGAAAAAGAGGGGAGAAGCACTTTGAATTATGTGACAAACCCAATGAAAATGTATTTTGGGACTCTTACCATCTTACAGAGAGTGCTTACAAACAATTGGCAGCTAGGATGTGGGGTTATACTGGAAACTCTCACACTATTGGGCCTTACACTATCAGCGATCTCTTCCAAGCCCACATGGCAAGTTTAAATGTCTTCATGTCTATCTTGGTTTTCTATCTGNGCTGTTTGATTCTCAACATTGATCACTCAGTTTCCCAAAGCATCCCCTGCCTGCCAGAAAAGCACACACCCCTTTTCATATTTGGAGATTCACTGTTTGATGCTGGAAACAACAACTACATCAATGCCACCACTTTTTTGCAGGCAAATTTTGCCCCATATGGAGAAACTTTCTTCAAGTATCCCACTGGAAGATTCTCTGATGGCCGTGTCATCCCAGATTTCATTGCTGAGTATGCAGAGTTGCCATTAATTCCACCANACCTGCATCCTGGATATCATACANAGGAATACATTTATGGGGTGAATTTTGCATCAGCGGGAGCTGGAGCTCTAGTTGAAACCAATCGTGGGCTGGTGATAGACTTAAAAACTCAGGTAAATTACTACACAGAAGTAAGCAAGCAATTCAGGCAGAAAGTAGGAGATGTGGAAGCCAAAAAATTGCTGGCCGAAGCTGTCTACATATTTAGCATAGGAGGCAATGACTATGGCACCCCTTTCCTAAATACAAACTCAACTAGTGGTGTGGTTCTTCCATACCCTCAACAAGAATTTGTAGACTTCGTGGTTGGCAACATTACAGCTGCAATCACAGAAATTTATAACGAAGGTGGAAGGAAATTTGGGTTTGTAAATGTGGGTCCTTTAAATTGCTTTCCTCTTCTAAGGAGGCTCGTGAATGGAACAACAATAAGTGCTTGTGNGGAAGAAGAAGGTTCGGCACTTGCAAGGCTACACAATGATGCTCTTTCCAAAATATTTCAGAAGCTAGAGAAACAATTAAAGGGATTCAAATACTCAATTACTGACTTCTACGGTGCACTTATTGAATTAATGATGTACCCTTCAAAATATGGTTTTGAAGAGGGGAATGCAGCTTGTTGTGGAGGCGGTCCTTACAGAGGAGATTATAGTTGTGGAGGGAAAAGGGGCATCGAAGAATATGAGCTATGTGACAATGTTAATAAGCATGTGTTCTTTGATTCTCTTCATTCTACAGAGAGGGCTGCTGAGCATTTCGCCAAGCTAATGTGGAGTGGAAACCGAGATGCAAACTACCCCCCTTATGGGGAATCTTTCTTCAACTATCCCACTGGAAGATTCTCTGATGGCCGTGTCATCCCAGATTTCATTGCTGAGTATGCAAAGTTGCCACTAATTCCTCCATATCTGCATCCTGGATACCACATTGATCAGTACATTTATGGGGTGAATTTTGCTTCTGCTGGAGCTGGGGCTCTAATTGAAACTAATCAAGGACAAGTGATAGACTTGAAAACACAGGCAAACTACTTTGTAGAAGTTAGTAAGCAATTCAAGCAGAAACTTGGAGATGTGGAAGCCAAAAATTTGTTGTCCAGAGCTGTCTACATATTTAGCATAGGAGGCAATGACTATGTCGCTTTTGCAAACCCAGCTAGTGGTGTGGTTCTTCCATACACTCNACAAGAATATGTAGACTTTGTGATTGGCAACACCACAACTGCAATCAAAGTAAAGGGAACAACAATAAGTGCCTGCCTGGAAGAAGAAGCTTCTGCACTTGCAAGGTTGCACAATAATGCTTTTTCCAAAGTACTCCAGAAGCTTGAGAAACAACTGAAGGGATTTAGATACTCCACCACTGACTTCTACGGTGCATTTGTTGAGCTAATTAAGTTCCCTTCAAAATATGGTTTTGAAGAGGGGAATGCAGCTTGTTGTGGAGGTGGTCCTTACAGAGGAGATCTGAGTTGTGGAGGGAAAAGAGGGATTCAACAATATAAGCTATGTAACAATGTTAATAAGTATGTGTTCTTCGATTCTCTTCATCACACGGAGAGTGCTGCTGAGCATATCGCCAAGCTAATGTGGAATGGAATCGCAAATAGAAAGAATAAATATGAAAAGCACACACCCCTTTTCATATTTGGAGATTCAATCTTTGATGCTGGAAACAATGATTACATCAATACCACCACTTTTTGGCAGGCAAACTACCCCCCTTATGGTCAAACTTTCTTCAACTATCCCACTGGAAGATTCTCTGATGGCCGTGTCATCCCAGATTTCATTGCTGAGTATGCAGAATTGCCATTAAGTCCACCCTACCTGCATCCTGGATACCATATTGATGACTACATTTATGGGGTGAATTTTGCATCAGGGGGAGCTGGGGCTCTTGTGATAGACTTAAAAACTCAGATAAATTACTTCACAGAAGTTAGCAAGCAATTCAGGCAGAAACTAGGAGATGAAGAAGCGAAGAAATTGTTGTCCAGAGCTGTCTACATATTTTGCGTAGGAAGCAATGACTATGCAATCAAAGAAATTTATAACAAAGGTGGAAGGAAATTTGGGTTTGTAAATGTGGGACCTTTAAATTGCTTTCCTCTTCTAAGGATCAGGATCGTTTCGAAGAGGGTAATGCAGCTTGCTGCGGAGGTGGTCCTTACAGAGGTTGTGGAGGGAAAAGGGGTATTGAAGAATATGAGCTATGTAACAATGTTGATAATGCTCATCATTCTCAGCACAGTAAGTTGCTATGCTACTGAGCCTAATCGAAAAGAGAAACAAGAACGCCATTCCCTCTTTGTGTTTGGGGATTCACTTTTTGATCCTGGAAACAATCAATACCTCAACAGAAGCATAATAGAAGCTTCAACTAGATGGCCTTACGGACAAACATACTTCAAGCATCCNACTGGAAGGCTCTCTGATGGGCGTATAGTCCCTGATCTCATAGCGCAATTTGCAAACTTGCCTATACTTCCACCATTCATGCAACATGGAGCCCATCAATTTAGTGATGGGGCTAATTTTGCATCAGCTGGAGCAGGCGTTCTTGCTCACACTCATTCAAACGTAATCAATCTTCCAACACAATTGAGCTACTTCAACGCTGTAGTGAAGTNACTAAAACAAAAACTAGGTGATAAAGAAGCCAAGAAGGTTTTGAACAATGCTGTGTACTTGTTTAGTATTGGTGGCAACGATTATTTCGGCTTTCACAACCAAAACCCCAATGAAGTTTATATTCTAGGNGGCAGAAAAATTGCGTTCCAAAATGCAGGGCCTTTGGGTTGTGTGCCAATTGCTAGAGCAATGACTGCTAAACTGGGTGGTGGGTGTGATGAAGTAGTATCAACAATGGCAAGACAACACAACAGAGCTCTATCTGGAGCACTGAAGAAGTTAGAAAGCACGTTACCAGGATTTAAGAAGGCAAGGCAGCCTGCTGTGGTAATGGAGCATATCGAGCTTCTGGGTGTGGAGGAGGATTTAGTAGAAAAGAGAAATTTGAGTAACCCTGCTGAATATGTATGGTTTGATGGAGCTCATACCACTGAGAGGGCAAATCGCCAATTAGCAGAGCTA

Protein Sequence

>Glyur002161s00032827.1
MKKFIVFFLVFLIALVSQTRGSKTKHNIALFIFGDSFLDAGNNNYINTTTLDQANFLPYGETYFKXPTGRFSDGRLVSDFIAEYANLPLVPPFLQPGFTQYYSGVNFASGGAGALVETFGGSVIPFKTQARNFKKVTAWLRHKLGSSEAKTLLSNSVYMFSIGSNDYLSPLFTHSGVLNSYSHSEYVGMVVGNLTSILKEIHKRGARKFAFLNLPPLGCLPATRIIHSEGNGSCLEELTLLANLHNQALSVVLLQLEKQLRGFKFSLYDEGKSACCGSGPFRGEYSCGGKRGEKHFELCDKPNENVFWDSYHLTESAYKQLAARMWGYTGNSHTIGPYTISDLFQAHMASLNVFMSILVFYLXCLILNIDHSVSQSIPCLPEKHTPLFIFGDSLFDAGNNNYINATTFLQANFAPYGETFFKYPTGRFSDGRVIPDFIAEYAELPLIPPXLHPGYHTXEYIYGVNFASAGAGALVETNRGLVIDLKTQVNYYTEVSKQFRQKVGDVEAKKLLAEAVYIFSIGGNDYGTPFLNTNSTSGVVLPYPQQEFVDFVVGNITAAITEIYNEGGRKFGFVNVGPLNCFPLLRRLVNGTTISACXEEEGSALARLHNDALSKIFQKLEKQLKGFKYSITDFYGALIELMMYPSKYGFEEGNAACCGGGPYRGDYSCGGKRGIEEYELCDNVNKHVFFDSLHSTERAAEHFAKLMWSGNRDANYPPYGESFFNYPTGRFSDGRVIPDFIAEYAKLPLIPPYLHPGYHIDQYIYGVNFASAGAGALIETNQGQVIDLKTQANYFVEVSKQFKQKLGDVEAKNLLSRAVYIFSIGGNDYVAFANPASGVVLPYTXQEYVDFVIGNTTTAIKVKGTTISACLEEEASALARLHNNAFSKVLQKLEKQLKGFRYSTTDFYGAFVELIKFPSKYGFEEGNAACCGGGPYRGDLSCGGKRGIQQYKLCNNVNKYVFFDSLHHTESAAEHIAKLMWNGIANRKNKYEKHTPLFIFGDSIFDAGNNDYINTTTFWQANYPPYGQTFFNYPTGRFSDGRVIPDFIAEYAELPLSPPYLHPGYHIDDYIYGVNFASGGAGALVIDLKTQINYFTEVSKQFRQKLGDEEAKKLLSRAVYIFCVGSNDYAIKEIYNKGGRKFGFVNVGPLNCFPLLRIRIVSKRVMQLAAEVVLTEVVEGKGVLKNMSYVTMLIMLIILSTVSCYATEPNRKEKQERHSLFVFGDSLFDPGNNQYLNRSIIEASTRWPYGQTYFKHPTGRLSDGRIVPDLIAQFANLPILPPFMQHGAHQFSDGANFASAGAGVLAHTHSNVINLPTQLSYFNAVVKXLKQKLGDKEAKKVLNNAVYLFSIGGNDYFGFHNQNPNEVYILGGRKIAFQNAGPLGCVPIARAMTAKLGGGCDEVVSTMARQHNRALSGALKKLESTLPGFKKARQPAVVMEHIELLGVEEDLVEKRNLSNPAEYVWFDGAHTTERANRQLAEL

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02161	20090	39815	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006629 lipid metabolic process

molecular_function

GO:0016298 lipase activity

GO:0016788 hydrolase activity, acting on ester bonds

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002161s00032827.1	PF00657.17	Lipase_GDSL	30	324	1.80E-20
Glyur002161s00032827.1	PF00657.17	Lipase_GDSL	387	706	6.90E-21
Glyur002161s00032827.1	PF00657.17	Lipase_GDSL	707	979	6.30E-12
Glyur002161s00032827.1	PF00657.17	Lipase_GDSL	997	1131	7.30E-11
Glyur002161s00032827.1	PF00657.17	Lipase_GDSL	1220	1481	2.00E-12
Glyur002161s00032827.2	PF00657.17	Lipase_GDSL	275	594	6.00E-21
Glyur002161s00032827.2	PF00657.17	Lipase_GDSL	596	867	7.20E-12
Glyur002161s00032827.2	PF00657.17	Lipase_GDSL	885	1019	6.40E-11
Glyur002161s00032827.2	PF00657.17	Lipase_GDSL	1108	1369	1.70E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.267
SRR1783600	control	0.251
SRR1783602	moderate drought stress	0.281
SRR1811619	moderate drought stress	0.253

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.655
DRR006520	Root Summer glycyrrhizin high producing strain	0.574
DRR006521	Root Winter glycyrrhizin high producing strain	2.622
DRR006522	Root Winter glycyrrhizin high producing strain	2.704
DRR006523	Root Summer glycyrrhizin low producing strain	0.647
DRR006524	Root Summer glycyrrhizin low producing strain	0.703
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.489
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.326

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.565
SRR2868004	Drought Stress (root)	19.743
SRR2967015	Control (root)	22.155

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.052
SRR9715740	Leaf	0.355
SRR9715741	Leaf	1.678
SRR9715739	Root	0.166
SRR9715742	Root	0.246
SRR9715743	Root	0.292

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.915
SRR8749028	MeJA induced 9h	17.957
SRR8749029	MeJA induced 9h	9.216
SRR8749030	Uninduced	55.394
SRR8749031	Uninduced	31.903
SRR8749032	Uninduced	16.731

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	7.381
SRR8400027	Control - Root	6.036