Gene detail information of Glyur002160s00044909 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003621262.1 | 1.02E-08 | KH domain-containing protein [Medicago truncatula] |
| trEMBL | tr|G7L217|G7L217_MEDTR | 4.00E-09 | RNA-binding KH domain protein {ECO:0000313|EMBL:AES77480.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02160 | 32188 | 36851 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.798 |
| SRR1783600 | control | 0.556 |
| SRR1783602 | moderate drought stress | 1.897 |
| SRR1811619 | moderate drought stress | 2.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.342 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.931 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.070 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.163 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.662 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.485 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.443 |
| SRR2868004 | Drought Stress (root) | 11.029 |
| SRR2967015 | Control (root) | 10.940 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.351 |
| SRR9715740 | Leaf | 1.056 |
| SRR9715741 | Leaf | 3.517 |
| SRR9715739 | Root | 0.297 |
| SRR9715742 | Root | 0.550 |
| SRR9715743 | Root | 0.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.074 |
| SRR8749028 | MeJA induced 9h | 2.510 |
| SRR8749029 | MeJA induced 9h | 1.236 |
| SRR8749030 | Uninduced | 0.877 |
| SRR8749031 | Uninduced | 2.001 |
| SRR8749032 | Uninduced | 0.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.299 |
| SRR8400027 | Control - Root | 12.675 |