Gene detail

Gene detail information of Glyur002157s00034193.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G24490.1	7.00E-67	Alcohol dehydrogenase transcription factor Myb/SANT-like family protein
NR	XP_004512963.1	1.58E-158	PREDICTED: probable serine/threonine-protein kinase kinX-like [Cicer arietinum]
Swissprot	tr\|Q9LJG8\|ASIL2_ARATH	2.00E-19	Trihelix transcription factor ASIL2 {ECO:0000305}
trEMBL	tr\|K7LER4\|K7LER4_SOYBN	2.00E-156	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G32130.2}

Sequence

Transcript Sequence

>Glyur002157s00034193.1
ATGGAAGACGACGCAAGGTACCCTCCAAAGTCTTTCCCTTTGAATCGCCAAAACCCTTCCCATCGCCAAAAACACCCAATTCGAGCATCTCCATATCACCGCCCACCCACTCTCCGCTACGAGGAAGCCGAATACAACAACGACGACGACGAAGACGACGAGGAACCCGTTGAATTCGACGATTACGACGACGACGAAGACGAGGTGCAAAATGGGTATGTCGGTAATTTCGAAAACAATGATGGGTACTCAAGGAATCCGAAGAAAAGGAAGGTACGAGGTTCCTCCTCTGTTTCCAACTACGAGTTTGCGCCACGTGCGAAATTCTCGTACGGGAACAACAGCCGAGGTGTTCCGTCTTCTTCGGCCGCGGCTTCGGCCGAAGAATGGTCGGAACACTCGACGTTTGTGCTGTTGGAGGTTTGGGGTGACAAGTTCCTCCAACTTGGGAGGAACAGTTTAAGGTCTGAGGAATGGCACGATGTTGCTGAGAAGGTTTCTGAGGAATTGAAGGTTGAGAGGAATGTTGCACAGTGTAGGAGTGTTTTGGATAAGCTGAAAAGGAGGTATAAAAAGGAAAAGGCTAGAATGGATGAGATGGGTTTGGGTGCTAGTTCCACAAAGTGGCCTTTTTTCAAGAAGATGGATATGTTGATGGCTTCTTCTGCAAGGCAAGAGTATGGTCTTGCATGTGGGGTTGATTCTGGTGAGTATGTGTTTATGAATACAAGGGTGTATTTGAATAGGTCTAATGGTTTTGATGAGATGAGGGATAGTCCTGGTGAGGTGTTGGCCGATTCTATTCACAAGTTTGGGAAGATATATGAGAAGATTGAGAACACCAAGAGGCAGCAGATGATGGAGTTGGAGAAGATGAGGTTGGACTTTAATAGGGAGTTGGAGCTGCAGAAGAAGCAGATTTTGGAAAGGGCTCAGGCTGAGATTGCTAAGATACAGGAAGTTGATGATGATGATGATGAGGAGGAGGAGGAGGAGGACGACGACACGGACACTTCTGCGGATAATCTCAGTGAATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02157	8502	9641	+

Gene family

Gene family	subfamily
Transcription Factors Family	Trihelix

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002157s00034193.1	PF13837.1	Myb_DNA-bind_4	128	218	1.80E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	28.998
SRR1783600	control	29.294
SRR1783602	moderate drought stress	32.243
SRR1811619	moderate drought stress	32.587

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	47.636
DRR006520	Root Summer glycyrrhizin high producing strain	47.446
DRR006521	Root Winter glycyrrhizin high producing strain	61.166
DRR006522	Root Winter glycyrrhizin high producing strain	59.950
DRR006523	Root Summer glycyrrhizin low producing strain	45.114
DRR006524	Root Summer glycyrrhizin low producing strain	42.040
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.525
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.074

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	30.919
SRR2868004	Drought Stress (root)	34.199
SRR2967015	Control (root)	35.890

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	25.752
SRR9715740	Leaf	36.836
SRR9715741	Leaf	41.593
SRR9715739	Root	17.713
SRR9715742	Root	34.370
SRR9715743	Root	28.473

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	36.655
SRR8749028	MeJA induced 9h	44.691
SRR8749029	MeJA induced 9h	35.762
SRR8749030	Uninduced	21.934
SRR8749031	Uninduced	38.213
SRR8749032	Uninduced	33.548

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	38.979
SRR8400027	Control - Root	32.424