Gene detail

Gene detail information of Glyur002155s00036295

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G10500.1	9.00E-50	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
NR	KHN14530.1	2.90E-138	Flavonol synthase/flavanone 3-hydroxylase [Glycine soja]
COG	NP_248837.1	8.00E-22	oxidoreductase [Pseudomonas aeruginosa PAO1]
Swissprot	tr\|Q07353\|FL3H_PETHY	2.00E-44	Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)
trEMBL	tr\|C6F121\|C6F121_SOYBN	2.00E-138	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G03120.1}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02155	4891	8455	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0016491 oxidoreductase activity

GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002155s00036295.1	PF14226.1	DIOX_N	37	141	1.60E-22
Glyur002155s00036295.1	PF03171.15	2OG-FeII_Oxy	176	269	3.60E-26

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.495
SRR1783600	control	5.119
SRR1783602	moderate drought stress	6.769
SRR1811619	moderate drought stress	7.266

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.978
DRR006520	Root Summer glycyrrhizin high producing strain	3.044
DRR006521	Root Winter glycyrrhizin high producing strain	14.523
DRR006522	Root Winter glycyrrhizin high producing strain	12.480
DRR006523	Root Summer glycyrrhizin low producing strain	0.548
DRR006524	Root Summer glycyrrhizin low producing strain	0.740
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.642
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.443

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.622
SRR2868004	Drought Stress (root)	5.370
SRR2967015	Control (root)	5.198

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.139
SRR9715740	Leaf	0.910
SRR9715741	Leaf	2.400
SRR9715739	Root	0.801
SRR9715742	Root	2.440
SRR9715743	Root	1.675

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.020
SRR8749028	MeJA induced 9h	5.502
SRR8749029	MeJA induced 9h	1.779
SRR8749030	Uninduced	4.007
SRR8749031	Uninduced	2.289
SRR8749032	Uninduced	1.943

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.413
SRR8400027	Control - Root	3.847