Gene detail information of Glyur002151s00043105 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53290.1 | 3.00E-13 | Galactosyltransferase family protein |
| NR | CDX98518.1 | 1.18E-15 | BnaC05g38570D [Brassica napus] |
| Swissprot | tr|Q8L7M1|B3GTE_ARATH | 3.00E-15 | Probable beta-1,3-galactosyltransferase 14 |
| trEMBL | tr|A0A078EGT2|A0A078EGT2_BRANA | 4.00E-16 | BnaC05g38570D protein {ECO:0000313|EMBL:CDX98518.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02151 | 45714 | 47511 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.061 |
| SRR1783600 | control | 0.031 |
| SRR1783602 | moderate drought stress | 4.335 |
| SRR1811619 | moderate drought stress | 4.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.721 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.766 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.570 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.550 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.831 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.182 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.441 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.118 |
| SRR2868004 | Drought Stress (root) | 6.272 |
| SRR2967015 | Control (root) | 6.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.321 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.289 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.082 |
| SRR8749028 | MeJA induced 9h | 16.582 |
| SRR8749029 | MeJA induced 9h | 17.002 |
| SRR8749030 | Uninduced | 17.229 |
| SRR8749031 | Uninduced | 42.414 |
| SRR8749032 | Uninduced | 36.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.472 |
| SRR8400027 | Control - Root | 0.000 |