Gene detail information of Glyur002149s00043518 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G26130.1 | 4.00E-17 | |
| NR | XP_003533756.1 | 4.61E-56 | PREDICTED: uncharacterized protein LOC100781094 [Glycine max] |
| trEMBL | tr|I1L1H5|I1L1H5_SOYBN | 2.00E-56 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G07160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02149 | 23337 | 24155 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002149s00043518.1 | PF14364.1 | DUF4408 | 11 | 42 | 1.50E-10 |
| Glyur002149s00043518.1 | PF05553.6 | DUF761 | 235 | 270 | 4.00E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.857 |
| SRR1783600 | control | 0.869 |
| SRR1783602 | moderate drought stress | 0.088 |
| SRR1811619 | moderate drought stress | 0.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.643 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.642 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.135 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.131 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.707 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.725 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.724 |
| SRR2868004 | Drought Stress (root) | 25.361 |
| SRR2967015 | Control (root) | 17.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.364 |
| SRR9715742 | Root | 0.727 |
| SRR9715743 | Root | 0.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.335 |
| SRR8400027 | Control - Root | 1.677 |