Gene detail information of Glyur002141s00036547 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G06025.1 | 3.00E-47 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | XP_003533783.1 | 1.80E-118 | PREDICTED: uncharacterized protein LOC100795426 isoform X1 [Glycine max] |
| trEMBL | tr|I1L1Q0|I1L1Q0_SOYBN | 7.00E-119 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G08070.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02141 | 20549 | 25552 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.658 |
| SRR1783600 | control | 8.724 |
| SRR1783602 | moderate drought stress | 9.747 |
| SRR1811619 | moderate drought stress | 9.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.101 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.451 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 74.224 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 75.187 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.262 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.298 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.965 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.072 |
| SRR2868004 | Drought Stress (root) | 22.666 |
| SRR2967015 | Control (root) | 27.968 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.528 |
| SRR9715740 | Leaf | 37.418 |
| SRR9715741 | Leaf | 32.024 |
| SRR9715739 | Root | 0.936 |
| SRR9715742 | Root | 3.681 |
| SRR9715743 | Root | 3.657 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.316 |
| SRR8749028 | MeJA induced 9h | 56.544 |
| SRR8749029 | MeJA induced 9h | 81.028 |
| SRR8749030 | Uninduced | 81.351 |
| SRR8749031 | Uninduced | 260.325 |
| SRR8749032 | Uninduced | 216.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.018 |
| SRR8400027 | Control - Root | 10.646 |