Gene detail information of Glyur002138s00040679 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G18900.1 | 5.00E-29 | Transducin/WD40 repeat-like superfamily protein |
| NR | KEH32548.1 | 3.98E-46 | transducin/WD-like repeat-protein [Medicago truncatula] |
| trEMBL | tr|A0A072UTZ2|A0A072UTZ2_MEDTR | 1.00E-46 | Transducin/WD-like repeat-protein {ECO:0000313|EMBL:KEH32548.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02138 | 26183 | 29072 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.721 |
| SRR1783600 | control | 8.831 |
| SRR1783602 | moderate drought stress | 11.782 |
| SRR1811619 | moderate drought stress | 12.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.788 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.950 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.138 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.063 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.358 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.584 |
| SRR2868004 | Drought Stress (root) | 1.253 |
| SRR2967015 | Control (root) | 0.959 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.855 |
| SRR9715740 | Leaf | 0.498 |
| SRR9715741 | Leaf | 0.771 |
| SRR9715739 | Root | 0.766 |
| SRR9715742 | Root | 2.127 |
| SRR9715743 | Root | 3.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.272 |
| SRR8749028 | MeJA induced 9h | 2.748 |
| SRR8749029 | MeJA induced 9h | 1.512 |
| SRR8749030 | Uninduced | 1.613 |
| SRR8749031 | Uninduced | 1.467 |
| SRR8749032 | Uninduced | 0.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.200 |
| SRR8400027 | Control - Root | 11.751 |