Gene detail

Gene detail information of Glyur002136s00034533

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G13490.2	4.00E-161	ADP/ATP carrier 2
NR	KHN39926.1	0	ADP,ATP carrier protein 1, mitochondrial [Glycine soja]
Swissprot	tr\|O22342\|ADT1_GOSHI	0	ADP,ATP carrier protein 1, mitochondrial (Precursor)
trEMBL	tr\|I1MJN2\|I1MJN2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G42900.1}

Sequence

Transcript Sequence

>Glyur002136s00034533.1
GAAGCTTCCGAGGGCTAACGAATATCTGGACGGTGATGATAGCACCCAAAAGCATGGGCTTAGTCCGACGTGGACGAACCAGAGTGTGACACGCGTACAAAGGACCCACCAACTTGCACCCCAACGCACCACTGCCGCATATAAAACCGGGTAGCTTTGCTCCGTTCAAAGCACGCAGCCGCACGCCTCCACACAAACCTCCTCGTGTCCCGTCCTTTCGCGTTCTCAAAAACCCTTTTTTCTCACATTAGCGAAAGGAACACCATGGTTGATCAGGTTCAGCACCCTACAATCATGGAGAAGGTGTCCGGCCAGCTCCACCTTCGATCTGGTCTTTCATCTGGCATTAAGAGTTATGATGGAGCCTACCGCCATCCTGCCCTGTATCAAAGATGCTCATTTGGGAATTACTCAAATGCAGCATTGCAGAATCCAGTGATGCCCTCAAGCCGGGCTACTATTGATTTATCTGCTGCTGCCACAACAGCCTCCCCAATCTTTGTTGCAGCTCCAGCTGAAAAAGGACATTTTCTTATTGACTTTCTCATGGGTGGTGTTTCAGCTGCAGTCTCCAAAACTGCTGCTGCTCCCATTGAGAGGGTCAAACTTTTGATACAGAATCAGGATGAGATGATCAAATCTGGCAGGCTTTCTGAGCCCTACAAGGGAATTACCGAATGTTTTACAAGAACAGTGAAGGAGGAGGGCTTTGTTTCCCTATGGAGAGGTAACACTGCAAATGTCATCCGTTATTTCCCCACTCAGGCTTTGAACTTTGCATTCAAAGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGATAGGGATGGTTACTGGAAATGGTTTGGTGGCAACTTGGCATCTGGTGGTGCTGCTGGTGCCTCATCCCTCTTATTTGTTTACTCTCTTGACTATGCCCGTGGAGAAAGGCAATTCAATGGTCTTGTTGATGTCTACAGGAAGACATTGGCATCTGATGGTATTGCTGGTCTTTACCGTGGTTTTAACATCTCCTGTGTTGGAATCATTGTGTATCGTGGTCTCTACTTTGGAATGTATGATTCCCTGAAACCAGTTCTCCTGACTGGAAAATTGCAGGATAGCTTTTTCGCTAGCTTTGGCCTTGGATGGCTCATCACCAATGGTGCTGGTCTAGCATCATACCCAATTGACACCGTTAGGAGAAGAATGATGATGACCTCTGGGGAAGCTGTCAAGTACAAGAGCTCCTTGGATGCATTCTCACAAATCCTCAAGAACGAGGGTGCCAAGTCATTGTTTAAGGGAGCTGGTGCGAACATCCTCCGTGCTGTTGCTGGTGCTGGTGTGCTTGCTGGCTACGACAAGCTACAGGTGATTGTGTTCGGCAAGAAATATGGATCCGGTGGCGCTTAATTTTTTAGCGTCTTGAGTTATATTATTGTTTTAGATGGCGATGAAAATCATTCAGTTGAGAGTTAGACTAATTGCTGCAGCAAATTTTGTTTAATAAGTTTACTCGGGTGGGANTTTATCCCAAAACCATTTTAAATTTCGGTTTAAAATTTCACATTTAAAGCATGATTTATTGGAGTGGCAGGATAAGTTACTGTCACTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02136	38606	41658	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006810 transport

GO:0055085 transmembrane transport

cellular_component
GO:0005743 mitochondrial inner membrane

molecular_function
GO:0005215 transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002136s00034533.1	PF00153.22	Mito_carr	87	184	1.10E-24
Glyur002136s00034533.1	PF00153.22	Mito_carr	192	273	1.50E-15
Glyur002136s00034533.1	PF00153.22	Mito_carr	279	365	1.30E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	76.151
SRR1783600	control	76.473
SRR1783602	moderate drought stress	42.210
SRR1811619	moderate drought stress	42.062

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	90.918
DRR006520	Root Summer glycyrrhizin high producing strain	89.583
DRR006521	Root Winter glycyrrhizin high producing strain	22.197
DRR006522	Root Winter glycyrrhizin high producing strain	21.222
DRR006523	Root Summer glycyrrhizin low producing strain	122.974
DRR006524	Root Summer glycyrrhizin low producing strain	122.046
DRR006525	Leaf Summer glycyrrhizin high producing strain	125.373
DRR006526	Leaf Summer glycyrrhizin high producing strain	124.910

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	297.702
SRR2868004	Drought Stress (root)	148.923
SRR2967015	Control (root)	124.146

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	154.835
SRR9715740	Leaf	97.186
SRR9715741	Leaf	135.085
SRR9715739	Root	76.533
SRR9715742	Root	73.896
SRR9715743	Root	68.849

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	152.593
SRR8749028	MeJA induced 9h	102.322
SRR8749029	MeJA induced 9h	80.648
SRR8749030	Uninduced	44.525
SRR8749031	Uninduced	15.451
SRR8749032	Uninduced	23.275

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	74.247
SRR8400027	Control - Root	84.202