Gene detail information of Glyur002136s00034530 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52105.1 | 1.00E-11 | |
| NR | XP_004516359.1 | 1.02E-18 | PREDICTED: uncharacterized protein LOC101509513 [Cicer arietinum] |
| trEMBL | tr|A0A072UUA6|A0A072UUA6_MEDTR | 7.00E-17 | DIS3-exonuclease-like protein {ECO:0000313|EMBL:KEH33227.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02136 | 23340 | 24824 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.447 |
| SRR1783600 | control | 4.839 |
| SRR1783602 | moderate drought stress | 6.067 |
| SRR1811619 | moderate drought stress | 4.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.333 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.600 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.441 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.104 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.870 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.246 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.528 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.825 |
| SRR2868004 | Drought Stress (root) | 16.885 |
| SRR2967015 | Control (root) | 10.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.423 |
| SRR9715740 | Leaf | 5.284 |
| SRR9715741 | Leaf | 10.108 |
| SRR9715739 | Root | 3.791 |
| SRR9715742 | Root | 6.512 |
| SRR9715743 | Root | 4.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.002 |
| SRR8749028 | MeJA induced 9h | 69.750 |
| SRR8749029 | MeJA induced 9h | 31.577 |
| SRR8749030 | Uninduced | 83.550 |
| SRR8749031 | Uninduced | 110.887 |
| SRR8749032 | Uninduced | 66.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.559 |
| SRR8400027 | Control - Root | 16.485 |