Gene detail information of Glyur002130s00040064 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37510.1 | 4.00E-18 | Ribonuclease III family protein |
| NR | XP_004511863.1 | 5.03E-20 | PREDICTED: uncharacterized protein LOC101500174 [Cicer arietinum] |
| trEMBL | tr|A0A022RXR4|A0A022RXR4_ERYGU | 2.00E-20 | Uncharacterized protein {ECO:0000313|EMBL:EYU44473.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02130 | 24054 | 27011 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.031 |
| SRR1783600 | control | 1.509 |
| SRR1783602 | moderate drought stress | 10.718 |
| SRR1811619 | moderate drought stress | 10.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.066 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.586 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.912 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.785 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.099 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.604 |
| SRR2868004 | Drought Stress (root) | 3.039 |
| SRR2967015 | Control (root) | 2.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 3.551 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.152 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.576 |
| SRR8749028 | MeJA induced 9h | 0.642 |
| SRR8749029 | MeJA induced 9h | 1.038 |
| SRR8749030 | Uninduced | 0.270 |
| SRR8749031 | Uninduced | 0.053 |
| SRR8749032 | Uninduced | 0.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.662 |
| SRR8400027 | Control - Root | 4.511 |