Gene detail information of Glyur002128s00036886 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G42470.1 | 2.00E-07 | Patched family protein |
| NR | AGV40493.1 | 4.63E-10 | hypothetical protein [Phaseolus vulgaris] |
| trEMBL | tr|T2D0S7|T2D0S7_PHAVU | 2.00E-10 | Uncharacterized protein {ECO:0000313|EMBL:AGV40493.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02128 | 19315 | 19916 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.849 |
| SRR1783600 | control | 6.435 |
| SRR1783602 | moderate drought stress | 8.775 |
| SRR1811619 | moderate drought stress | 9.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.250 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.721 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.212 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.277 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.409 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.756 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.754 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.206 |
| SRR2868004 | Drought Stress (root) | 9.481 |
| SRR2967015 | Control (root) | 10.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.545 |
| SRR9715740 | Leaf | 9.856 |
| SRR9715741 | Leaf | 13.227 |
| SRR9715739 | Root | 3.240 |
| SRR9715742 | Root | 5.606 |
| SRR9715743 | Root | 3.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.991 |
| SRR8749028 | MeJA induced 9h | 2.999 |
| SRR8749029 | MeJA induced 9h | 2.710 |
| SRR8749030 | Uninduced | 7.267 |
| SRR8749031 | Uninduced | 5.088 |
| SRR8749032 | Uninduced | 5.942 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.098 |
| SRR8400027 | Control - Root | 15.893 |