Gene detail information of Glyur002126s00036413 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | CDK26665.1 | 7.25E-09 | unnamed protein product [Kuraishia capsulata CBS 1993] |
| trEMBL | tr|K7N1R7|K7N1R7_SOYBN | 5.00E-24 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G12241.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02126 | 16869 | 22228 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.824 |
| SRR1783600 | control | 2.657 |
| SRR1783602 | moderate drought stress | 4.381 |
| SRR1811619 | moderate drought stress | 4.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.756 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.610 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.069 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.027 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.064 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.525 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.097 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.216 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.277 |
| SRR2868004 | Drought Stress (root) | 13.050 |
| SRR2967015 | Control (root) | 11.353 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.393 |
| SRR9715740 | Leaf | 1.130 |
| SRR9715741 | Leaf | 1.512 |
| SRR9715739 | Root | 0.327 |
| SRR9715742 | Root | 2.317 |
| SRR9715743 | Root | 1.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.322 |
| SRR8749028 | MeJA induced 9h | 3.061 |
| SRR8749029 | MeJA induced 9h | 1.808 |
| SRR8749030 | Uninduced | 2.612 |
| SRR8749031 | Uninduced | 2.665 |
| SRR8749032 | Uninduced | 2.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.489 |
| SRR8400027 | Control - Root | 7.900 |