Gene detail information of Glyur002118s00041222 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11090.1 | 1.00E-05 | serine-rich protein-related |
| NR | XP_006588084.1 | 5.55E-24 | PREDICTED: uncharacterized protein LOC102666822 [Glycine max] |
| trEMBL | tr|B9SZN1|B9SZN1_RICCO | 4.00E-24 | Putative uncharacterized protein {ECO:0000313|EMBL:EEF30937.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02118 | 13027 | 13735 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 59.030 |
| SRR1783600 | control | 57.981 |
| SRR1783602 | moderate drought stress | 104.866 |
| SRR1811619 | moderate drought stress | 102.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 89.284 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 84.857 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 121.528 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 111.720 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 50.672 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 49.758 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.307 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.048 |
| SRR2868004 | Drought Stress (root) | 19.494 |
| SRR2967015 | Control (root) | 11.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.117 |
| SRR9715740 | Leaf | 10.597 |
| SRR9715741 | Leaf | 20.909 |
| SRR9715739 | Root | 2.451 |
| SRR9715742 | Root | 12.534 |
| SRR9715743 | Root | 10.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.534 |
| SRR8749028 | MeJA induced 9h | 0.837 |
| SRR8749029 | MeJA induced 9h | 0.338 |
| SRR8749030 | Uninduced | 0.226 |
| SRR8749031 | Uninduced | 0.626 |
| SRR8749032 | Uninduced | 0.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.221 |
| SRR8400027 | Control - Root | 4.206 |