Gene detail information of Glyur002108s00034781 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G01910.4 | 7.00E-14 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| NR | XP_003528888.1 | 1.15E-15 | PREDICTED: ATPase ASNA1 homolog [Glycine max] |
| trEMBL | tr|I1KII8|I1KII8_SOYBN | 4.00E-16 | ATPase ASNA1 homolog {ECO:0000256|HAMAP-Rule:MF_03112} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02108 | 22717 | 27039 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.172 |
| SRR1783600 | control | 0.264 |
| SRR1783602 | moderate drought stress | 0.343 |
| SRR1811619 | moderate drought stress | 0.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.880 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.884 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.325 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 28.252 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.501 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.818 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.411 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.980 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.493 |
| SRR2868004 | Drought Stress (root) | 9.980 |
| SRR2967015 | Control (root) | 6.208 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.880 |
| SRR9715740 | Leaf | 0.958 |
| SRR9715741 | Leaf | 1.572 |
| SRR9715739 | Root | 0.068 |
| SRR9715742 | Root | 0.560 |
| SRR9715743 | Root | 0.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.735 |
| SRR8749028 | MeJA induced 9h | 3.495 |
| SRR8749029 | MeJA induced 9h | 0.614 |
| SRR8749030 | Uninduced | 10.979 |
| SRR8749031 | Uninduced | 6.771 |
| SRR8749032 | Uninduced | 5.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.732 |
| SRR8400027 | Control - Root | 1.992 |