Gene detail information of Glyur002098s00031938 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12320.1 | 6.00E-15 | |
| NR | KHN12332.1 | 2.50E-155 | hypothetical protein glysoja_034424 [Glycine soja] |
| trEMBL | tr|K7KJY1|K7KJY1_SOYBN | 3.00E-155 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G16721.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02098 | 44202 | 48372 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.250 |
| SRR1783600 | control | 7.093 |
| SRR1783602 | moderate drought stress | 16.922 |
| SRR1811619 | moderate drought stress | 16.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.665 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.665 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.441 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.611 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.066 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.261 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.825 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.980 |
| SRR2868004 | Drought Stress (root) | 27.779 |
| SRR2967015 | Control (root) | 8.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.784 |
| SRR9715740 | Leaf | 50.843 |
| SRR9715741 | Leaf | 37.372 |
| SRR9715739 | Root | 3.734 |
| SRR9715742 | Root | 11.342 |
| SRR9715743 | Root | 9.857 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.139 |
| SRR8749028 | MeJA induced 9h | 14.512 |
| SRR8749029 | MeJA induced 9h | 4.082 |
| SRR8749030 | Uninduced | 15.927 |
| SRR8749031 | Uninduced | 2.223 |
| SRR8749032 | Uninduced | 7.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.191 |
| SRR8400027 | Control - Root | 14.488 |