Gene detail information of Glyur002090s00035439.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41790.1 | 4.00E-47 | Insulinase (Peptidase family M16) family protein |
| NR | KEH23640.1 | 2.96E-73 | insulin-degrading enzyme [Medicago truncatula] |
| COG | NP_231704.1 | 1.00E-10 | peptidase insulinase family protein [Vibrio cholerae O1 biovar El Tor str. N16961] |
| Swissprot | tr|O22941|PXM16_ARATH | 1.00E-52 | Zinc-metallopeptidase, peroxisomal |
| trEMBL | tr|A0A072UCQ9|A0A072UCQ9_MEDTR | 1.00E-73 | Insulin-degrading enzyme {ECO:0000313|EMBL:KEH23640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02090 | 23956 | 27716 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01408 | IDE, ide | EC:3.4.24.56 | Alzheimer's disease | map05010 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002090s00035439.1 | PF05193.16 | Peptidase_M16_C | 176 | 260 | 2.30E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.367 |
| SRR1783600 | control | 0.089 |
| SRR1783602 | moderate drought stress | 0.091 |
| SRR1811619 | moderate drought stress | 0.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.097 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.486 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.350 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.090 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.386 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.098 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.228 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.112 |
| SRR2868004 | Drought Stress (root) | 0.070 |
| SRR2967015 | Control (root) | 0.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.057 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.056 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.238 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.219 |
| SRR8400027 | Control - Root | 0.598 |