Gene detail information of Glyur002086s00043343 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G25490.1 | 1.00E-06 | C-repeat/DRE binding factor 1 |
| NR | KEH42085.1 | 1.26E-30 | CBF/DREB1 transcription factor [Medicago truncatula] |
| Swissprot | tr|P93835|DRE1B_ARATH | 4.00E-08 | Dehydration-responsive element-binding protein 1B |
| trEMBL | tr|A0A072VVF7|A0A072VVF7_MEDTR | 5.00E-31 | CBF/DREB1 transcription factor {ECO:0000313|EMBL:KEH42085.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02086 | 36599 | 36910 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.143 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.345 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.576 |
| SRR2868004 | Drought Stress (root) | 0.350 |
| SRR2967015 | Control (root) | 0.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.705 |
| SRR9715740 | Leaf | 4.293 |
| SRR9715741 | Leaf | 14.787 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.218 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.412 |
| SRR8749028 | MeJA induced 9h | 0.214 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.386 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.338 |
| SRR8400027 | Control - Root | 0.105 |