Gene detail

Gene detail information of Glyur002081s00034183

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G18830.1	0	polyol/monosaccharide transporter 5
NR	XP_004507415.1	0	PREDICTED: polyol transporter 5-like [Cicer arietinum]
COG	YP_004651064.1	3.00E-89	metabolite transport protein ywtG [Parachlamydia acanthamoebae UV-7]
Swissprot	tr\|Q8VZ80\|PLT5_ARATH	0	Polyol transporter 5
trEMBL	tr\|A0A072UM27\|A0A072UM27_MEDTR	0	Polyol/monosaccharide transporter 1 {ECO:0000313\|EMBL:KEH30426.1}

Sequence

Transcript Sequence

>Glyur002081s00034183.1
GTAATTGAGGTCAGAAAGAGAGAGAGTTCATTGGGGCGCTTCTTCTATCATGTGGGACTCCATGGTCTAAGGTGATGTAAGCCTCTAGTCTATATAAGCACGCTTAGCGGAAGCTTACNCTCTGCACCATTTGCCACCTCTACCACTAGTTTCTTAACACTATCACTGAAAAATAGATGCTGGCAATTTAACACACTTGTAATCTCTCCCTGTGTGTGAAAATTACCCTGCTTCAAGATGACTGAGGGAAAGGTAGTTGAAGCAGAGGAGGCTCAAAAAACNCTTGAGGATTTTGGTCCTCAAAAGAAGCCCAAGCGGAATAAGTTCGCTTTTGCTTGTGCTATGCTGGCTTCCATGACTTCCATCTTGCTTGGCTACGATATTGGTGTGATGAGTGGAGCCGCAATCTACATAAAGAGAGACCTCAAAGTCTCGGACGTGCAAATAGAGATCCTGTTGGGGATCATCAACATCTACTCTCTGATAGGCTCATGCCTCGCCGGCAGAACCTCCGACTGGATCGGCCGCCGTTACACCATCGTTTTCGCCGGCGCCATCTTCTTCACCGGAGCCCTCCTCATGGGGTTCTCCCCCAACTACTCTTTTCTCATGTTCGGCCGTTTCATCGCCGGCATTGGCATCGGCTACGCCCTCATGATTGCCCCCGTTTACACCGCCGAAGTCTCCCCTGCCTCATCCCGTGGCTTCCTCACCTCTTTTCCCGAGGTTTTCATAAATGCTGGGATATTACTTGGATACATATCGAACTATGCATTTTCGAAGATGTCACTTCACTTGGGTTGGAGGATGATGCTTGGAGTCGGTGCAATCCCTTCCGTGATCTTAGGTGTGGGAGTGTTGGCGATGCCAGAGTCCCCACGGTGGCTCGTGATGAGGGGTCGTATCGGAGANGCAACGAAAGTGCTGAACAAAACCTCAGACTCAAAGGAAGAGGCTCAGCTAAGGCTAGCCGACATAAAGCGAGCCGCGGGTATCCCCGACGACGGTTGCAACGACGACGTCGTTCAGGTGAACAAGCGCAACAACGGTGATGGCGTATGGAAAGAGCTCTTCCTCTATCCAACACCCGCNGTTCGTCACATCGTAATAGCGGCTCTTGGGATTCACTTCTTCCAACAAGCATCNGGCATAGACGCCGTCGTTTTGTACAGCCCAAAAATCTTCGAAAAGGCTGGGATAAAAAGCGACAGGGATCAGCTTCTCGCAACCATGGCCGTTGGATTAGTCAAGACACTCTTCATCTTAGTGGCCACGTTTATGTTGGACCGCGTGGGTCGTCGACCGTTGCTACTCTCAAGTGTCGGGGGAATGGTTTTTTCGCTACTCACGCTCGCTGGGAGCCTCTTGATCATTGATCGATCCGAAACTAAGGTGATGTGGGCCGTTGGATTAAGCATTGCAATGGTGTTGTTGTATGTCGCGACGTTCTCGATCGGTGCGGGTCCCATCACGTGGGTCTATAGTTCTGAGATCTTCCCGTTGAGGCTGCGGGCTCAGGGTGCGGCTATGGGAGTCGTGGTGAATAGGGTCACGAGTGGGGTCATCTCAATGACTTTTCTGTCCCTGTCCGAAGGGATCACCTTTGAGGGGGCTTTCTTCCTTTTTGGAACTATTGCTACCGTTGGATGGATATTCTTCTATACTATGCTTCCGGAAACACGAGGGAAAACGCTTGAAGATATGGAAGGGTCTTTTGGTAAATTTTGGCGCAAATCAAACAGTACCACTAACAATACTAAGGGGGTTGACCATGGTAATAATCCCCAACAGGTGGCNCAGGTCCAGTTAGGGACCAATGTCTCAACTAGTTAGACAAAAGGTTTAATTACCGATAAAAAAAAAGACAAAAGGTTTATTTATTAGGGGTCATGTAATGTACTGTAATGTAATGTAATATAGTAACTTTTATGTGTGTGTTTTTAGAGTAGCTTTCCAAATGAAAATGCAAAAAGTTGCAAGACTTGTATGCAAAAAGAATTTTACGAAACTTTGTTCAGTTCATGATAAGGAAAAAAAAGAGTGTTTTATCACATTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02081	6246	8939	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055085 transmembrane transport

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function

GO:0005215 transporter activity

GO:0022857 transmembrane transporter activity

GO:0022891 substrate-specific transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002081s00034183.1	PF00083.19	Sugar_tr	34	491	2.50E-103

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	30.638
SRR1783600	control	30.430
SRR1783602	moderate drought stress	49.499
SRR1811619	moderate drought stress	49.446

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.738
DRR006520	Root Summer glycyrrhizin high producing strain	1.771
DRR006521	Root Winter glycyrrhizin high producing strain	0.536
DRR006522	Root Winter glycyrrhizin high producing strain	0.527
DRR006523	Root Summer glycyrrhizin low producing strain	10.570
DRR006524	Root Summer glycyrrhizin low producing strain	10.395
DRR006525	Leaf Summer glycyrrhizin high producing strain	44.740
DRR006526	Leaf Summer glycyrrhizin high producing strain	45.053

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	42.018
SRR2868004	Drought Stress (root)	42.801
SRR2967015	Control (root)	71.384

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	300.328
SRR9715740	Leaf	245.423
SRR9715741	Leaf	421.314
SRR9715739	Root	155.715
SRR9715742	Root	43.874
SRR9715743	Root	61.477

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.577
SRR8749028	MeJA induced 9h	12.617
SRR8749029	MeJA induced 9h	10.815
SRR8749030	Uninduced	0.641
SRR8749031	Uninduced	0.149
SRR8749032	Uninduced	0.787

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	99.961
SRR8400027	Control - Root	124.959