Gene detail information of Glyur002081s00034180 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49320.1 | 7.00E-43 | unknown seed protein like 1 |
| NR | XP_004507416.1 | 0 | PREDICTED: BURP domain-containing protein 9-like [Cicer arietinum] |
| Swissprot | tr|Q70KG5|RAF1A_WHEAT | 1.00E-46 | Protein RAFTIN 1A (Precursor) |
| trEMBL | tr|I1LQ51|I1LQ51_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G04880.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02081 | 1269 | 2759 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002081s00034180.1 | PF03181.10 | BURP | 269 | 489 | 3.40E-62 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.399 |
| SRR1783600 | control | 15.273 |
| SRR1783602 | moderate drought stress | 6.936 |
| SRR1811619 | moderate drought stress | 6.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.073 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.072 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.074 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.073 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.067 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 315.625 |
| SRR2868004 | Drought Stress (root) | 313.431 |
| SRR2967015 | Control (root) | 592.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.043 |
| SRR9715741 | Leaf | 0.241 |
| SRR9715739 | Root | 1.159 |
| SRR9715742 | Root | 2.232 |
| SRR9715743 | Root | 1.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.942 |
| SRR8749028 | MeJA induced 9h | 1.566 |
| SRR8749029 | MeJA induced 9h | 0.881 |
| SRR8749030 | Uninduced | 0.085 |
| SRR8749031 | Uninduced | 0.185 |
| SRR8749032 | Uninduced | 0.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.376 |
| SRR8400027 | Control - Root | 31.074 |