Gene detail information of Glyur002077s00033742 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02200.2 | 2.00E-08 | far-red-elongated hypocotyl1-like |
| NR | XP_004514391.1 | 6.51E-106 | PREDICTED: uncharacterized protein LOC101508957 isoform X2 [Cicer arietinum] |
| trEMBL | tr|I1KK08|I1KK08_SOYBN | 3.00E-100 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G16070.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02077 | 20548 | 23942 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.157 |
| SRR1783600 | control | 13.100 |
| SRR1783602 | moderate drought stress | 13.697 |
| SRR1811619 | moderate drought stress | 13.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.470 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.957 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.290 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.863 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.707 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.827 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.318 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.334 |
| SRR2868004 | Drought Stress (root) | 9.248 |
| SRR2967015 | Control (root) | 9.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.709 |
| SRR9715740 | Leaf | 8.509 |
| SRR9715741 | Leaf | 5.822 |
| SRR9715739 | Root | 0.708 |
| SRR9715742 | Root | 2.522 |
| SRR9715743 | Root | 1.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.435 |
| SRR8749028 | MeJA induced 9h | 4.565 |
| SRR8749029 | MeJA induced 9h | 3.533 |
| SRR8749030 | Uninduced | 5.956 |
| SRR8749031 | Uninduced | 2.172 |
| SRR8749032 | Uninduced | 2.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.281 |
| SRR8400027 | Control - Root | 9.305 |