Gene detail information of Glyur002065s00035682 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10750.1 | 1.00E-122 | Protein of unknown function (DUF1336) |
| NR | XP_010108297.1 | 3.74E-178 | hypothetical protein L484_007150 [Morus notabilis] |
| Swissprot | tr|Q8VZF6|EDR2L_ARATH | 2.00E-63 | Protein ENHANCED DISEASE RESISTANCE 2-like |
| trEMBL | tr|W9S9Y9|W9S9Y9_9ROSA | 1.00E-178 | Uncharacterized protein {ECO:0000313|EMBL:EXC18777.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02065 | 11681 | 12571 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002065s00035682.1 | PF07059.7 | DUF1336 | 44 | 259 | 9.90E-78 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.306 |
| SRR1783600 | control | 27.732 |
| SRR1783602 | moderate drought stress | 24.454 |
| SRR1811619 | moderate drought stress | 24.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.585 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.640 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.310 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.360 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.941 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.388 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.084 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.239 |
| SRR2868004 | Drought Stress (root) | 14.489 |
| SRR2967015 | Control (root) | 15.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.896 |
| SRR9715740 | Leaf | 15.088 |
| SRR9715741 | Leaf | 15.350 |
| SRR9715739 | Root | 76.108 |
| SRR9715742 | Root | 28.045 |
| SRR9715743 | Root | 36.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.023 |
| SRR8749028 | MeJA induced 9h | 3.041 |
| SRR8749029 | MeJA induced 9h | 3.663 |
| SRR8749030 | Uninduced | 1.023 |
| SRR8749031 | Uninduced | 0.208 |
| SRR8749032 | Uninduced | 0.574 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.731 |
| SRR8400027 | Control - Root | 39.452 |