Gene detail information of Glyur002060s00044008 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70890.1 | 2.00E-15 | MLP-like protein 43 |
| NR | KHN05143.1 | 6.89E-48 | MLP-like protein 43 [Glycine soja] |
| Swissprot | tr|Q9SSK5|MLP43_ARATH | 1.00E-18 | MLP-like protein 43 |
| trEMBL | tr|K7K8V1|K7K8V1_SOYBN | 3.00E-48 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G25950.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02060 | 48252 | 49683 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002060s00044008.1 | PF00407.14 | Bet_v_1 | 3 | 97 | 2.80E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1558.468 |
| SRR1783600 | control | 1561.614 |
| SRR1783602 | moderate drought stress | 2130.311 |
| SRR1811619 | moderate drought stress | 2122.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2842.678 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2753.885 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.198 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.657 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 426.125 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 421.412 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.031 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2557.809 |
| SRR2868004 | Drought Stress (root) | 2362.045 |
| SRR2967015 | Control (root) | 3333.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.446 |
| SRR9715740 | Leaf | 0.438 |
| SRR9715741 | Leaf | 0.185 |
| SRR9715739 | Root | 630.003 |
| SRR9715742 | Root | 1022.799 |
| SRR9715743 | Root | 907.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.853 |
| SRR8749028 | MeJA induced 9h | 6.334 |
| SRR8749029 | MeJA induced 9h | 20.982 |
| SRR8749030 | Uninduced | 0.274 |
| SRR8749031 | Uninduced | 15.122 |
| SRR8749032 | Uninduced | 3.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3712.131 |
| SRR8400027 | Control - Root | 3273.928 |