Gene detail information of Glyur002058s00032912 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23880.1 | 2.00E-14 | F-box and associated interaction domains-containing protein |
| NR | XP_003589364.1 | 2.03E-84 | F-box [Medicago truncatula] |
| Swissprot | tr|Q9LIR8|FBK67_ARATH | 5.00E-16 | F-box/kelch-repeat protein At3g23880 |
| trEMBL | tr|G7I5X5|G7I5X5_MEDTR | 8.00E-85 | F-box protein interaction domain protein {ECO:0000313|EMBL:AES59615.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02058 | 48418 | 49647 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.037 |
| SRR1783600 | control | 27.053 |
| SRR1783602 | moderate drought stress | 28.041 |
| SRR1811619 | moderate drought stress | 26.596 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.208 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.169 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.496 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.592 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.286 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.743 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.667 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.409 |
| SRR2868004 | Drought Stress (root) | 13.053 |
| SRR2967015 | Control (root) | 11.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.626 |
| SRR9715740 | Leaf | 3.903 |
| SRR9715741 | Leaf | 3.029 |
| SRR9715739 | Root | 23.319 |
| SRR9715742 | Root | 17.549 |
| SRR9715743 | Root | 15.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.757 |
| SRR8749028 | MeJA induced 9h | 8.988 |
| SRR8749029 | MeJA induced 9h | 4.263 |
| SRR8749030 | Uninduced | 1.273 |
| SRR8749031 | Uninduced | 0.989 |
| SRR8749032 | Uninduced | 0.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.157 |
| SRR8400027 | Control - Root | 15.794 |