Gene detail information of Glyur002058s00032909 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G33205.1 | 2.00E-29 | Serinc-domain containing serine and sphingolipid biosynthesis protein |
| NR | XP_004497767.1 | 8.68E-74 | PREDICTED: probable serine incorporator-like [Cicer arietinum] |
| trEMBL | tr|A0A072VIB5|A0A072VIB5_MEDTR | 5.00E-70 | TMS membrane protein/tumor differentially protein {ECO:0000313|EMBL:KEH41193.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02058 | 39043 | 41445 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.344 |
| SRR1783600 | control | 0.596 |
| SRR1783602 | moderate drought stress | 0.621 |
| SRR1811619 | moderate drought stress | 0.567 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.227 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.148 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.368 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.224 |
| SRR2868004 | Drought Stress (root) | 5.754 |
| SRR2967015 | Control (root) | 4.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.107 |
| SRR9715739 | Root | 0.232 |
| SRR9715742 | Root | 0.023 |
| SRR9715743 | Root | 0.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.047 |
| SRR8749028 | MeJA induced 9h | 0.054 |
| SRR8749029 | MeJA induced 9h | 0.615 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.071 |
| SRR8749032 | Uninduced | 0.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.935 |
| SRR8400027 | Control - Root | 31.219 |