Gene detail information of Glyur002054s00042355 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G20015.1 | 3.00E-46 | Eukaryotic aspartyl protease family protein |
| NR | XP_007153018.1 | 9.95E-86 | hypothetical protein PHAVU_003G000900g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LHE3|ASPG2_ARATH | 7.00E-58 | Protein ASPARTIC PROTEASE IN GUARD CELL 2 (Precursor) |
| trEMBL | tr|V7C4A7|V7C4A7_PHAVU | 4.00E-86 | Uncharacterized protein {ECO:0000313|EMBL:ESW25012.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02054 | 15512 | 16207 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002054s00042355.1 | PF14543.1 | TAXi_N | 134 | 221 | 1.70E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 37.795 |
| SRR1783600 | control | 38.077 |
| SRR1783602 | moderate drought stress | 32.051 |
| SRR1811619 | moderate drought stress | 32.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.409 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.293 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.260 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.313 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.731 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.234 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.357 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.048 |
| SRR2868004 | Drought Stress (root) | 12.025 |
| SRR2967015 | Control (root) | 15.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.591 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.375 |
| SRR9715739 | Root | 52.767 |
| SRR9715742 | Root | 22.569 |
| SRR9715743 | Root | 27.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.510 |
| SRR8749028 | MeJA induced 9h | 2.564 |
| SRR8749029 | MeJA induced 9h | 1.938 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 50.146 |
| SRR8400027 | Control - Root | 57.678 |