Gene detail

Gene detail information of Glyur002052s00038822

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G23690.1	6.00E-48	Disease resistance-responsive (dirigent-like protein) family protein
NR	XP_007040397.1	1.75E-124	Disease resistance-responsive family protein [Theobroma cacao]
Swissprot	tr\|P13240\|DR206_PEA	2.00E-75	Disease resistance response protein 206 (Precursor)
trEMBL	tr\|A0A061G658\|A0A061G658_THECC	7.00E-125	Disease resistance-responsive family protein {ECO:0000313\|EMBL:EOY24898.1}

Sequence

Transcript Sequence

>Glyur002052s00038822.1
ATGAATGCAGCTAATGCAACATCCGCAATAGTGGCAGCTCCAGAAGGTGCTAACTTAACCAAATTGGCAGGTCAATTCCACTTTGGAAACTTGGCAGTTTTCGATGACCCCATCACATTGGACAACAACCTTCACTCCAAACCCGTTGGGAGGGCACAGGGCTTCTACATTTATGACACAAAGAACACTTTCACAGCTTGGCTGGGATTCACATTTGTTCTTAATGCCACAAATTACCATCAGGGAACCATCACATTCGCTGGAGCTGACCCCATTTTGAAGAAAAGCAGAGATATCTCTGTCACTGGTGGCACTGGGGACTTCTTTATGCACAGAGGAATTGCCACTGTTATGACTGATGCATTTGAAGGGGAAGTTTATTTCCGCCTTCGTGTTGATATCAAGTTCTTCGAGTGCTGTCGTAGACATAAAGCCAAGCCAAAAATAAGCTGTTTACCGGTTGCAATTCCTTTCTTGGGCGATAATAATCATAATCATACCTTGAAAGCCAAGACTTGGCTTAAAGAACTCATGAGGCTCGTTTCAGCCCTCTTCCTCTTGCTCCTAATCACGGTGGTGGAATCCTCTGCCGCTACNACCAGATGGAGAAAACGGGTTCACGAGCCGTGCAAGAGGTTGGTGTTTTACTTCCACGACATTATCTACAACGGTCACAACGCCAAGAATGCCACGTCAGCCATTGTAGGAACACCCGCATGGGGAAACAGNACTGTATTGGCAGGGAAGAACCATTTTGGTGATTTGGTTGTTTTTGATGACCCCATCACATTGGACAACAATTTACACTCACCCNCGGTTGGACGTGCTCAAGGGTTCTACATATACGATAAGAAAGAGATTTTCACCGCGTGGCTTGGTTTCTCCTTTGTGTTCAACTCTACCCAACACAAGGGTACCATAAACTTTGCCGGTGCTGACCCTTTGATGAATAAGACCAGGGACATTTCNGTAATTGGAGGGACTGGTGACTTCTTCATGACTAGGGGAGTAGCCACTCTCTCCACGGATGCCTTTGAAGGGGAAGTTTATTTCAGGCTTCGGGCGGATATTAATTTGTATGAATGTTGGTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02052	32217	36377	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002052s00038822.1	PF03018.9	Dirigent	4	135	6.10E-40
Glyur002052s00038822.1	PF03018.9	Dirigent	210	357	2.20E-45

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.759
SRR1783600	control	0.994
SRR1783602	moderate drought stress	0.664
SRR1811619	moderate drought stress	0.590

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.234
DRR006520	Root Summer glycyrrhizin high producing strain	3.359
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	2.861
DRR006524	Root Summer glycyrrhizin low producing strain	3.022
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.190
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.322

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	16.052
SRR2868004	Drought Stress (root)	8.659
SRR2967015	Control (root)	8.179

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.526
SRR9715740	Leaf	0.392
SRR9715741	Leaf	0.541
SRR9715739	Root	6.406
SRR9715742	Root	5.587
SRR9715743	Root	5.058

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.260
SRR8749028	MeJA induced 9h	0.050
SRR8749029	MeJA induced 9h	0.048
SRR8749030	Uninduced	0.098
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.156

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.501
SRR8400027	Control - Root	12.728