Gene detail information of Glyur002051s00038334 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33150.2 | 5.00E-07 | lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme |
| NR | KEH32411.1 | 6.19E-16 | lysine-ketoglutarate reductase/saccharopine dehydrogenase [Medicago truncatula] |
| Swissprot | tr|Q9SMZ4|AASS_ARATH | 3.00E-08 | Saccharopine dehydrogenase |
| trEMBL | tr|A0A072USV4|A0A072USV4_MEDTR | 2.00E-16 | Lysine-ketoglutarate reductase/saccharopine dehydrogenase {ECO:0000313|EMBL:KEH32411.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02051 | 11602 | 12465 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.015 |
| SRR1783600 | control | 6.218 |
| SRR1783602 | moderate drought stress | 7.642 |
| SRR1811619 | moderate drought stress | 5.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.189 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.017 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.680 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.141 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.029 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.342 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.352 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.143 |
| SRR2868004 | Drought Stress (root) | 5.276 |
| SRR2967015 | Control (root) | 4.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.878 |
| SRR9715740 | Leaf | 2.520 |
| SRR9715741 | Leaf | 3.052 |
| SRR9715739 | Root | 0.247 |
| SRR9715742 | Root | 0.615 |
| SRR9715743 | Root | 0.304 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.888 |
| SRR8749028 | MeJA induced 9h | 2.437 |
| SRR8749029 | MeJA induced 9h | 1.221 |
| SRR8749030 | Uninduced | 1.724 |
| SRR8749031 | Uninduced | 0.203 |
| SRR8749032 | Uninduced | 0.638 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.624 |
| SRR8400027 | Control - Root | 7.934 |