Gene detail information of Glyur002050s00038761 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN43063.1 | 5.30E-40 | hypothetical protein glysoja_007593 [Glycine soja] |
| trEMBL | tr|M5VZ62|M5VZ62_PRUPE | 3.00E-27 | Uncharacterized protein {ECO:0000313|EMBL:EMJ02273.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02050 | 34800 | 35204 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.703 |
| SRR1783600 | control | 0.585 |
| SRR1783602 | moderate drought stress | 1.150 |
| SRR1811619 | moderate drought stress | 1.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.301 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.307 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.778 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.612 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.755 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.352 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.921 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.785 |
| SRR2868004 | Drought Stress (root) | 0.934 |
| SRR2967015 | Control (root) | 1.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.198 |
| SRR9715740 | Leaf | 0.300 |
| SRR9715741 | Leaf | 1.247 |
| SRR9715739 | Root | 0.061 |
| SRR9715742 | Root | 0.701 |
| SRR9715743 | Root | 1.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.725 |
| SRR8749028 | MeJA induced 9h | 0.869 |
| SRR8749029 | MeJA induced 9h | 0.308 |
| SRR8749030 | Uninduced | 0.287 |
| SRR8749031 | Uninduced | 0.449 |
| SRR8749032 | Uninduced | 0.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.263 |
| SRR8400027 | Control - Root | 1.784 |