Gene detail information of Glyur002046s00040526 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G20640.1 | 2.00E-56 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_007133119.1 | 0 | hypothetical protein PHAVU_011G153000g [Phaseolus vulgaris] |
| Swissprot | tr|Q8GXT3|BH123_ARATH | 3.00E-68 | Transcription factor bHLH123 |
| trEMBL | tr|V7AJT6|V7AJT6_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW05113.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02046 | 641 | 5322 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.561 |
| SRR1783600 | control | 1.550 |
| SRR1783602 | moderate drought stress | 1.828 |
| SRR1811619 | moderate drought stress | 1.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.172 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.907 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.439 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.361 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.787 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.671 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.311 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.054 |
| SRR2868004 | Drought Stress (root) | 9.552 |
| SRR2967015 | Control (root) | 17.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.043 |
| SRR9715740 | Leaf | 3.355 |
| SRR9715741 | Leaf | 1.540 |
| SRR9715739 | Root | 0.574 |
| SRR9715742 | Root | 8.924 |
| SRR9715743 | Root | 7.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 48.716 |
| SRR8749028 | MeJA induced 9h | 25.775 |
| SRR8749029 | MeJA induced 9h | 19.753 |
| SRR8749030 | Uninduced | 1.355 |
| SRR8749031 | Uninduced | 0.459 |
| SRR8749032 | Uninduced | 1.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.962 |
| SRR8400027 | Control - Root | 3.662 |