Gene detail information of Glyur002038s00029102


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G55290.22.00E-28ATPase, V0 complex, subunit E
NRAFK35362.13.08E-40unknown [Lotus japonicus]
Swissprottr|Q9FLN5|VA0E1_ARATH9.00E-37V-type proton ATPase subunit e1
trEMBLtr|I3S520|I3S520_LOTJA1.00E-40Uncharacterized protein {ECO:0000313|EMBL:AFK35362.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold020381633518738-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0015991  ATP hydrolysis coupled proton transport


cellular_component

GO:0033179  proton-transporting V-type ATPase, V0 domain


molecular_function

GO:0015078  hydrogen ion transmembrane transporter activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002038s00029102.1PF05493.8ATP_synt_H1682.80E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.691
SRR1783600control9.464
SRR1783602moderate drought stress13.143
SRR1811619moderate drought stress13.109

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.003
DRR006520Root Summer glycyrrhizin high producing strain23.782
DRR006521Root Winter glycyrrhizin high producing strain7.955
DRR006522Root Winter glycyrrhizin high producing strain7.455
DRR006523Root Summer glycyrrhizin low producing strain18.456
DRR006524Root Summer glycyrrhizin low producing strain17.966
DRR006525Leaf Summer glycyrrhizin high producing strain17.082
DRR006526Leaf Summer glycyrrhizin high producing strain16.646

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)18.847
SRR2868004Drought Stress (root)16.991
SRR2967015Control (root)15.143

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf25.073
SRR9715740Leaf24.654
SRR9715741Leaf21.058
SRR9715739Root8.476
SRR9715742Root9.587
SRR9715743Root9.863

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.436
SRR8749028MeJA induced 9h4.446
SRR8749029MeJA induced 9h5.460
SRR8749030Uninduced4.760
SRR8749031Uninduced4.640
SRR8749032Uninduced5.536

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root24.312
SRR8400027Control - Root26.527

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved