Gene detail information of Glyur002038s00029098 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10080.1 | 6.00E-16 | RmlC-like cupins superfamily protein |
| NR | XP_007142844.1 | 2.34E-26 | hypothetical protein PHAVU_007G021700g [Phaseolus vulgaris] |
| Swissprot | tr|Q6ESF0|GL24_ORYSJ | 9.00E-21 | Germin-like protein 2-4 (Precursor) |
| trEMBL | tr|V7BD64|V7BD64_PHAVU | 9.00E-27 | Uncharacterized protein {ECO:0000313|EMBL:ESW14838.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02038 | 1808 | 2116 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.769 |
| SRR1783600 | control | 8.076 |
| SRR1783602 | moderate drought stress | 16.005 |
| SRR1811619 | moderate drought stress | 14.757 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.785 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.143 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.448 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.853 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.042 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.340 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.176 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.026 |
| SRR2868004 | Drought Stress (root) | 18.736 |
| SRR2967015 | Control (root) | 13.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.912 |
| SRR9715740 | Leaf | 10.009 |
| SRR9715741 | Leaf | 1.764 |
| SRR9715739 | Root | 4.288 |
| SRR9715742 | Root | 0.373 |
| SRR9715743 | Root | 1.908 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.413 |
| SRR8749028 | MeJA induced 9h | 4.790 |
| SRR8749029 | MeJA induced 9h | 10.934 |
| SRR8749030 | Uninduced | 10.933 |
| SRR8749031 | Uninduced | 6.111 |
| SRR8749032 | Uninduced | 4.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.870 |
| SRR8400027 | Control - Root | 17.949 |