Gene detail information of Glyur002034s00042389 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42300.1 | 7.00E-05 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02034 | 25360 | 28420 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.715 |
| SRR1783600 | control | 8.134 |
| SRR1783602 | moderate drought stress | 8.824 |
| SRR1811619 | moderate drought stress | 8.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.510 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.920 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.947 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.370 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.218 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.337 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.967 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.876 |
| SRR2868004 | Drought Stress (root) | 2.796 |
| SRR2967015 | Control (root) | 3.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.208 |
| SRR9715740 | Leaf | 2.793 |
| SRR9715741 | Leaf | 3.104 |
| SRR9715739 | Root | 0.597 |
| SRR9715742 | Root | 2.517 |
| SRR9715743 | Root | 2.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.796 |
| SRR8749028 | MeJA induced 9h | 6.716 |
| SRR8749029 | MeJA induced 9h | 2.422 |
| SRR8749030 | Uninduced | 0.918 |
| SRR8749031 | Uninduced | 0.259 |
| SRR8749032 | Uninduced | 0.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.509 |
| SRR8400027 | Control - Root | 6.542 |