Gene detail information of Glyur002034s00042387 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G02645.1 | 7.00E-119 | Plant protein of unknown function (DUF247) |
| NR | KHN01303.1 | 0 | Putative UPF0481 protein [Glycine soja] |
| Swissprot | tr|P0C897|Y3264_ARATH | 7.00E-159 | Putative UPF0481 protein At3g02645 |
| trEMBL | tr|K7KZB7|K7KZB7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G03115.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02034 | 15309 | 17003 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002034s00042387.1 | PF03140.10 | DUF247 | 38 | 543 | 4.60E-68 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.589 |
| SRR1783600 | control | 6.512 |
| SRR1783602 | moderate drought stress | 7.587 |
| SRR1811619 | moderate drought stress | 7.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.726 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.699 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.394 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.339 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.265 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.958 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.638 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.599 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.168 |
| SRR2868004 | Drought Stress (root) | 38.302 |
| SRR2967015 | Control (root) | 27.860 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.713 |
| SRR9715740 | Leaf | 0.839 |
| SRR9715741 | Leaf | 1.812 |
| SRR9715739 | Root | 14.715 |
| SRR9715742 | Root | 128.152 |
| SRR9715743 | Root | 107.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.033 |
| SRR8749028 | MeJA induced 9h | 7.002 |
| SRR8749029 | MeJA induced 9h | 0.721 |
| SRR8749030 | Uninduced | 23.467 |
| SRR8749031 | Uninduced | 5.142 |
| SRR8749032 | Uninduced | 7.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.811 |
| SRR8400027 | Control - Root | 16.899 |