Gene detail information of Glyur002025s00033626 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28706.1 | 3.00E-94 | pfkB-like carbohydrate kinase family protein |
| NR | XP_006588711.1 | 7.84E-160 | PREDICTED: ketohexokinase isoform X3 [Glycine max] |
| trEMBL | tr|I1L8I5|I1L8I5_SOYBN | 8.00E-153 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G04720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02025 | 44053 | 50349 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002025s00033626.1 | PF00294.19 | PfkB | 75 | 247 | 1.80E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.467 |
| SRR1783600 | control | 3.784 |
| SRR1783602 | moderate drought stress | 2.898 |
| SRR1811619 | moderate drought stress | 3.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.460 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.761 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.702 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.775 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.121 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.177 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 27.969 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.906 |
| SRR2868004 | Drought Stress (root) | 8.589 |
| SRR2967015 | Control (root) | 8.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 31.170 |
| SRR9715740 | Leaf | 42.752 |
| SRR9715741 | Leaf | 28.474 |
| SRR9715739 | Root | 1.923 |
| SRR9715742 | Root | 1.737 |
| SRR9715743 | Root | 1.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.309 |
| SRR8749028 | MeJA induced 9h | 7.774 |
| SRR8749029 | MeJA induced 9h | 4.515 |
| SRR8749030 | Uninduced | 7.497 |
| SRR8749031 | Uninduced | 4.300 |
| SRR8749032 | Uninduced | 3.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.238 |
| SRR8400027 | Control - Root | 5.710 |