Gene detail

Gene detail information of Glyur002025s00033625

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G43900.3	myosin 2
NR	XP_004495037.1	PREDICTED: myosin-H heavy chain-like [Cicer arietinum]
Swissprot	tr\|Q9LKB9\|MYO6_ARATH	Myosin-6
trEMBL	tr\|K7LHD6\|K7LHD6_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G04750.2}

Sequence

Transcript Sequence

>Glyur002025s00033625.1
ATGACATCGAATTGGTTCCTAAAAGACAGAACTCATNGCATTCAATCATCATTGAAGGACCAATTTGATGTTTACAATAGATGGAGGACCAATGCTGCTGCTGCCAATCCTGTTGTTGGTTCCCATGTTTGGGTGGAGGATTCTGATGTAGCTTGGATAGATGGTCAGGTCTTGGAGGTTAAGGGGGAAGAAATAAAGGTCCTTTGCACTTCAGGGAAGACGGTTGTTGTTAAAGCTTCCAGTGTTTATCATAAAGATACCGAAGCCCCACCATGTGGAGTGGATGATATGACAAAGCTTGCTTATCTGCATGAACCTGGTGTCCTAGATAATCTGAGATCAAGATATGACATCAATGAAATTTATGTGNGTATTCCAGATGCCAACTCTCCAAATATTGTCTCCCTTTCAATATTGGTTAGTGGTGAAAGTGGGGCTGGTAAAACAGAAAGCACAAAGTTACTNATGCGCTATCTTGCTTACATGGGAGGGAGAGCTAATGCTGCTGAAGGTAGAACTGTTGAGCAGAAAGTCCTGGAGTCCAATCCTGTTCTAGAAGCCTTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGACCAGAGGGGAAGAATCTCTGGAGCTGCTATCAGAACTTATCTGCTGGAAAGATCACGTGTTTGCCAGCTATCGGATCCAGAGAGGAATTATCACTGTTTTTATATGCTCTGTGCTGCACCTCAAGAGGTTGTTCAGAAGTACAGATTAGGAAACCCAAGAACATTTCATTATCTAAATCAATCAAATTGCTATGAGTTGGAAGGTGTTGATGAATTTAAAGAATATTGTGATACAAAAAGAGCAATGGATGTTGTTGGAATAAGTTCTGAGGAGCAGGAAGCAATATTTCGAGTGGTTGCTGCAATTTTGCATCTTGGCAACATTGAATTTACNAAAGGGAAGGAAATTGACTCATCTATGCCCAAAGATGAAAAATCTCGGTTTCATCTGCAAACTGCTGCCGAACTTTTCATGTGTGATGCAAAGGCACTTGAAGACTCTCTTTGCAAGCGTGTAATTGTTACTCGTGACGAAAATATTACAAAATGGCTGGATCCAGAAGCTGCTGTACTTAGCCGAGATGCTTTAGCTAAGATTGTGTACACAAGGTTGTTTGACTGGCTGGTGGATAAAATTAATAATTCAATTGGTCAAGATCCCGACTCAAAGTCCTTAATTGGTGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATTAACTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAGGAGATTGATTGGAGTTACATTGAATTTGTTGACAATCAAGATATTTTGGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTCTTGATGAAGCTTGCATGTTTCCTAGATCAACACATGAAACATTTGCGCAAAAGTTGTATCAGACCTTCAAAAACCATAAAAGGTTCAGCAAGCCTAAATTATCACGTAGTGACTTCACAATTTGCCATTATGCTGGTGATGTCACTTATCAAACTGATTTATTCCTGGACAAGAACAAAGATTATGTTGTTGCGGAACATCAGGCACTTCTGTATGCTTCCAAATGCCCCTTTGTATCNGGTTTATTTGTCCCCTCGCCTGAGGAATCTTCCAAACAATCAAAGTTCTCTTCAATAGGTTCCCGGTTTAAGCAACAATTACAAGCACTACTTGAAACTCTCAGTGCTACTGAGCCACACTACATCCGTTGTGTTAAACCCAATAATCTTCTTAAGCCAGCAATTTTTGAGCATAAAAATGGAGTCATGGAGGCAATTAGAATAAGCTGCGCTGGGTATCCCACCAGAAAAACCTTTGATGAATTTGTGGATCGATTTGGGCTTCTTGCACCTGAAGCTTTGGATGGAAGTTCTGATGAGGTCACTGCTTGCAAGAGGATTCTGGAGAAGGTTGGACTTAAAGGATATCAGATTGGTAAAACAAAAGTGTTTCTTAGAGCTGGTCAAATGGCAGAACTAGATACTCGTAGAAGTGAAATCTTAGGAAACTCAGCAAACATTATTCAAAGGAAAGTTCGTTCCTATTTGGCCCGCCGTAGTTTTGTCTCAATTCGCTTATCTGCTATACAGATTCAAGCTGCATGCAGAGGACAACTTGCCCGTCAAGTTTATGAGGGACTGCGACAGGAAGCTTCTAGTCTGATGATTCAGAGGTATTTCCGCATGCATATTGCCAGGAATGNATACAAAGAATTGTATAGCTCGGCTATTTCTATTCAAACTGGTATGCGAGGGATGGCTGCTCGTTGTGAGCTACGCTTTAGAAAGCAGACCAGTGCAGCTATTGTCATCCAGAGCCACTGCCGGAAATACTTGGCACAACATCATTTTATGAACTTAAAGAAGGCAGCAATTGCAACACAATGTGCATGGAGAGGAAAAGTTGCTAGGCGAGAACTACNAAAGCTCAAGATGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTGCATTGAGGTTGCAGCTGGAAAAACGCTNGAGGATTGACATGGAAGAAGCAAAAACACAAGAAAATGGAAAATTACAGTCTGCTTTGCAAGAGATGCAACTTCAGTTTAAGGAAACTAAGTTATTGCTTCAAAAGGAGCGTGAGGCTGCAAAAAGAGAAGCAGAGAGAGTGCCTGTCATACAAGAAGTTCCTGTTGTTGACCATGCTTTGTTGGAGAAGCTCACTAGTGAAAATGAGAAACTCAAGACCTTGGTGAGTTCACTGGAACAGAAAATTGATGAAACAGAGAAGAGGTATGAAGAGGCAAATAAAATTAGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCTGAATCGAAAATAATCCATTTGAAAACTGCTATGCAAAGGCTTGAAGAGAAATTCTTAGATATGGAATCCGAAAACCAGGTTCTTCGACAACAGTCTTTGCTAAACTCATCTGTGAAAACAATGTCAGAGCACCTTTCTACCCATGTATATGAGAAATTGGAAAATGGTCACCATGTAGGAGAGGATCAGAAAGCTGCTGAAACACAGAGTGTCACACCTGTCAAAAAGTTTGGTACAGAATCTGATAGCAAATTGAGGAGATCCTACATTGAACGTCAACATGAAAATGTCGATGCGCTTGTCAACTGTGTTATGAAAAATATTGGTTTCCATCATGGAAAGCCTAATCAAGATGACAATGATCTTATGGCCTATTGGTTGTCAAATACATCTGCACTATTGTTTTTGCTCCAACAAAGTTTGAAATCTGGTGGTGCAACTGATGCAACCCCAGTTAAAAAACCACCAAATCCAACATCCCTCTTTGGAAGAATGACTATGGGTTTTCGATCGTCTCCTTCTTCTGCCAACCTTCCCACCCCAGCATTGGAGGTTGTACGCAAGGTAGAGGCTAAATATCCTGCTTTGCTTTTCAAGCAACAGCTCACAGCCTATGTGGAGAAAATATACGGTATCCTGCGAGACAACTTGAAGAAAGAGTTGGCATCATTACTTTCATTATGTATCCAGGCACCAAGAACATCNAAGGGAGTATTGCGAACTGGCCGATCTTTTGGTAAAGATTCTCCCATGGGTCACTGGCAGAGTATTATTGAATNCCTCAACACCCTTCTCTGTACTCTGAAAGAGAACTTTGTGCCTCCTGTCCTTATCCAAAAGATCTTCACTCAAACATTTTCATATATTAATGTTCAACTCTTCAATAGTCTTCTTCTGCGGCGTGATTGTTGCACATTCAGCAATGGGGAATATGTGAAAGCTGGTTTAGCAGAATTGGAGCTGTGGTGCTGCCAAGCAAAGGAGGAGTATGCTGGTTCATCTTGGGATGAGCTNAAGCACATAAGACAGGCTGTAGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCGTATGATGAAATCATTAATGATTTATGCCCTATCTTGAGTGTCCAGCAGCTGTATAGAATATGTACACTTTACTGGGATGCTAACTACAACACTCGAAGTGTATCCCCAGATGTCCTTTCAAGCATGAGGGTACTTATGGCTGAGGACTCTAATAATCCTCAGAGTGATTCTTTCTTGTTGGATGATAGTTCCAGCATCCCATTCTCAGTTGATGACCTCTCTACATCATTGCAAGAGAGAGAGTTTTCAGATATGAAACCAGCAGATGAGCTTCTTGAGAACCCTGCCTTCGGATTTTTAAATGAGTAGGGCAGCAAGGGAAGCTTAGTAGTATACATTCATCATAGTCATCAAGGAAGGCAACGAAATCAGTTGTCGGTCCTTGCCATATTTGTTTTGTAAATCCATTTCTATTTTTTATTTTTTTTTCCTACAAACTTTTTTGTTCTTGTTTTTATTGTCCTGCATCTTGTTTATCATATCCCTGCATCATCATGGCCCTGATGTAAAGTTATTTTTTCATTCTTTTCTTGGCATTCAATTTGTAAAATCTTCATTTTAAAGAGGGGCAGGGATATTGATAGGTTTTTTGAGCTTGCCTGGTATGTCCATTTTCCTTGNCCTGGTTAATTTGGCCAGAAAAGCATTAAAAAGTGAAGCTGAGCTGCTTATAATTTTGTTTTTGGGTCCAAGCTC

Protein Sequence

>Glyur002025s00033625.1
MTSNWFLKDRTHXIQSSLKDQFDVYNRWRTNAAAANPVVGSHVWVEDSDVAWIDGQVLEVKGEEIKVLCTSGKTVVVKASSVYHKDTEAPPCGVDDMTKLAYLHEPGVLDNLRSRYDINEIYVXIPDANSPNIVSLSILVSGESGAGKTESTKLLMRYLAYMGGRANAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPQEVVQKYRLGNPRTFHYLNQSNCYELEGVDEFKEYCDTKRAMDVVGISSEEQEAIFRVVAAILHLGNIEFTKGKEIDSSMPKDEKSRFHLQTAAELFMCDAKALEDSLCKRVIVTRDENITKWLDPEAAVLSRDALAKIVYTRLFDWLVDKINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTDLFLDKNKDYVVAEHQALLYASKCPFVSGLFVPSPEESSKQSKFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNLLKPAIFEHKNGVMEAIRISCAGYPTRKTFDEFVDRFGLLAPEALDGSSDEVTACKRILEKVGLKGYQIGKTKVFLRAGQMAELDTRRSEILGNSANIIQRKVRSYLARRSFVSIRLSAIQIQAACRGQLARQVYEGLRQEASSLMIQRYFRMHIARNXYKELYSSAISIQTGMRGMAARCELRFRKQTSAAIVIQSHCRKYLAQHHFMNLKKAAIATQCAWRGKVARRELXKLKMAARETGALQAAKNKLEKQVEDLALRLQLEKRXRIDMEEAKTQENGKLQSALQEMQLQFKETKLLLQKEREAAKREAERVPVIQEVPVVDHALLEKLTSENEKLKTLVSSLEQKIDETEKRYEEANKISEERLKQALDAESKIIHLKTAMQRLEEKFLDMESENQVLRQQSLLNSSVKTMSEHLSTHVYEKLENGHHVGEDQKAAETQSVTPVKKFGTESDSKLRRSYIERQHENVDALVNCVMKNIGFHHGKPNQDDNDLMAYWLSNTSALLFLLQQSLKSGGATDATPVKKPPNPTSLFGRMTMGFRSSPSSANLPTPALEVVRKVEAKYPALLFKQQLTAYVEKIYGILRDNLKKELASLLSLCIQAPRTSKGVLRTGRSFGKDSPMGHWQSIIEXLNTLLCTLKENFVPPVLIQKIFTQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSVQQLYRICTLYWDANYNTRSVSPDVLSSMRVLMAEDSNNPQSDSFLLDDSSSIPFSVDDLSTSLQEREFSDMKPADELLENPAFGFLNE

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02025	15079	30931	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016459 myosin complex

molecular_function

GO:0003774 motor activity

GO:0005515 protein binding

GO:0005524 ATP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002025s00033625.1	PF02736.14	Myosin_N	41	78	2.30E-07
Glyur002025s00033625.1	PF00063.16	Myosin_head	137	699	5.30E-199
Glyur002025s00033625.1	PF00612.22	IQ	717	734	0.011
Glyur002025s00033625.1	PF00612.22	IQ	740	757	0.00085
Glyur002025s00033625.1	PF00612.22	IQ	764	783	0.0079
Glyur002025s00033625.1	PF00612.22	IQ	812	830	0.0004
Glyur002025s00033625.1	PF00612.22	IQ	835	853	0.0019
Glyur002025s00033625.1	PF01843.14	DIL	1276	1383	6.30E-37

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.128
SRR1783600	control	16.186
SRR1783602	moderate drought stress	10.384
SRR1811619	moderate drought stress	10.445

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.808
DRR006520	Root Summer glycyrrhizin high producing strain	11.574
DRR006521	Root Winter glycyrrhizin high producing strain	7.415
DRR006522	Root Winter glycyrrhizin high producing strain	7.134
DRR006523	Root Summer glycyrrhizin low producing strain	19.743
DRR006524	Root Summer glycyrrhizin low producing strain	19.557
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.466
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.639

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	36.239
SRR2868004	Drought Stress (root)	53.995
SRR2967015	Control (root)	44.372

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.531
SRR9715740	Leaf	8.670
SRR9715741	Leaf	13.424
SRR9715739	Root	2.255
SRR9715742	Root	11.945
SRR9715743	Root	10.981

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.215
SRR8749028	MeJA induced 9h	24.547
SRR8749029	MeJA induced 9h	11.505
SRR8749030	Uninduced	15.804
SRR8749031	Uninduced	22.188
SRR8749032	Uninduced	9.943

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	30.517
SRR8400027	Control - Root	41.689