Gene detail information of Glyur002022s00030455 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13310.1 | 4.00E-13 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_003544555.1 | 2.95E-32 | PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Glycine max] |
| Swissprot | tr|Q9FYB5|DNJ11_ARATH | 2.00E-13 | Chaperone protein dnaJ 11, chloroplastic (Precursor) |
| trEMBL | tr|I1M6D2|I1M6D2_SOYBN | 1.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G01440.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02022 | 31488 | 31932 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002022s00030455.1 | PF00226.26 | DnaJ | 42 | 73 | 4.40E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.233 |
| SRR1783600 | control | 4.583 |
| SRR1783602 | moderate drought stress | 2.776 |
| SRR1811619 | moderate drought stress | 2.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.710 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.749 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.725 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.754 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.329 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.922 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.472 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.597 |
| SRR2868004 | Drought Stress (root) | 0.470 |
| SRR2967015 | Control (root) | 1.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.742 |
| SRR9715740 | Leaf | 0.733 |
| SRR9715741 | Leaf | 0.535 |
| SRR9715739 | Root | 3.797 |
| SRR9715742 | Root | 5.002 |
| SRR9715743 | Root | 4.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 60.290 |
| SRR8749028 | MeJA induced 9h | 57.424 |
| SRR8749029 | MeJA induced 9h | 101.278 |
| SRR8749030 | Uninduced | 29.491 |
| SRR8749031 | Uninduced | 50.904 |
| SRR8749032 | Uninduced | 73.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.105 |
| SRR8400027 | Control - Root | 3.336 |