Gene detail information of Glyur002020s00037405 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15020.2 | 3.00E-07 | hAT transposon superfamily |
| NR | XP_007134308.1 | 5.78E-26 | hypothetical protein PHAVU_010G036200g [Phaseolus vulgaris] |
| trEMBL | tr|V7AL45|V7AL45_PHAVU | 2.00E-26 | Uncharacterized protein {ECO:0000313|EMBL:ESW06302.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02020 | 12308 | 19608 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.418 |
| SRR1783600 | control | 2.683 |
| SRR1783602 | moderate drought stress | 2.663 |
| SRR1811619 | moderate drought stress | 2.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.858 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.069 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.006 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.337 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.056 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.071 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.255 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.586 |
| SRR2868004 | Drought Stress (root) | 0.541 |
| SRR2967015 | Control (root) | 0.740 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.497 |
| SRR9715740 | Leaf | 1.489 |
| SRR9715741 | Leaf | 2.355 |
| SRR9715739 | Root | 0.386 |
| SRR9715742 | Root | 0.890 |
| SRR9715743 | Root | 0.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.065 |
| SRR8749028 | MeJA induced 9h | 2.849 |
| SRR8749029 | MeJA induced 9h | 0.807 |
| SRR8749030 | Uninduced | 0.735 |
| SRR8749031 | Uninduced | 0.205 |
| SRR8749032 | Uninduced | 0.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.998 |
| SRR8400027 | Control - Root | 5.010 |