Gene detail information of Glyur002013s00039485 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G76210.1 | 1.00E-30 | Arabidopsis protein of unknown function (DUF241) |
| NR | XP_004513395.1 | 8.77E-119 | PREDICTED: uncharacterized protein LOC101488502 [Cicer arietinum] |
| trEMBL | tr|A0A072VS58|A0A072VS58_MEDTR | 1.00E-116 | DUF241 domain protein {ECO:0000313|EMBL:KEH40940.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02013 | 23012 | 23737 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002013s00039485.1 | PF03087.9 | DUF241 | 7 | 235 | 3.20E-44 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.466 |
| SRR1783600 | control | 0.501 |
| SRR1783602 | moderate drought stress | 0.161 |
| SRR1811619 | moderate drought stress | 0.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.152 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.512 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.398 |
| SRR2868004 | Drought Stress (root) | 0.002 |
| SRR2967015 | Control (root) | 0.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.299 |
| SRR9715740 | Leaf | 0.229 |
| SRR9715741 | Leaf | 0.185 |
| SRR9715739 | Root | 0.341 |
| SRR9715742 | Root | 0.267 |
| SRR9715743 | Root | 0.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.650 |
| SRR8749028 | MeJA induced 9h | 9.632 |
| SRR8749029 | MeJA induced 9h | 8.515 |
| SRR8749030 | Uninduced | 18.341 |
| SRR8749031 | Uninduced | 2.845 |
| SRR8749032 | Uninduced | 4.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.268 |
| SRR8400027 | Control - Root | 0.024 |