Gene detail information of Glyur002012s00036494 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G24300.2 | 0 | Calmodulin-binding protein |
| NR | XP_003546611.1 | 0 | PREDICTED: uncharacterized protein LOC100775528 [Glycine max] |
| trEMBL | tr|K7MCM7|K7MCM7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G24761.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02012 | 7144 | 12744 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002012s00036494.1 | PF07887.6 | Calmodulin_bind | 80 | 369 | 6.10E-109 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.875 |
| SRR1783600 | control | 20.803 |
| SRR1783602 | moderate drought stress | 13.599 |
| SRR1811619 | moderate drought stress | 13.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.780 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.540 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.804 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.422 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 39.906 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 39.566 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.511 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 56.239 |
| SRR2868004 | Drought Stress (root) | 56.540 |
| SRR2967015 | Control (root) | 50.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.706 |
| SRR9715740 | Leaf | 15.456 |
| SRR9715741 | Leaf | 27.162 |
| SRR9715739 | Root | 3.344 |
| SRR9715742 | Root | 21.779 |
| SRR9715743 | Root | 17.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.776 |
| SRR8749028 | MeJA induced 9h | 55.505 |
| SRR8749029 | MeJA induced 9h | 24.854 |
| SRR8749030 | Uninduced | 47.977 |
| SRR8749031 | Uninduced | 36.692 |
| SRR8749032 | Uninduced | 21.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.075 |
| SRR8400027 | Control - Root | 31.256 |