Gene detail information of Glyur002011s00044715 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38370.1 | 3.00E-81 | Plant protein of unknown function (DUF827) |
| NR | XP_003516427.1 | 0 | PREDICTED: WEB family protein At2g38370-like [Glycine max] |
| Swissprot | tr|F4ISY0|Y2837_ARATH | 2.00E-113 | WEB family protein At2g38370 |
| trEMBL | tr|I1J7M8|I1J7M8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G32380.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02011 | 19933 | 22619 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002011s00044715.1 | PF05701.6 | WEMBL | 27 | 128 | 3.50E-12 |
| Glyur002011s00044715.1 | PF05701.6 | WEMBL | 163 | 387 | 2.60E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.477 |
| SRR1783600 | control | 18.549 |
| SRR1783602 | moderate drought stress | 7.833 |
| SRR1811619 | moderate drought stress | 7.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.701 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.369 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.198 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.044 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.329 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.883 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.294 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.281 |
| SRR2868004 | Drought Stress (root) | 25.170 |
| SRR2967015 | Control (root) | 27.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.382 |
| SRR9715740 | Leaf | 11.905 |
| SRR9715741 | Leaf | 17.302 |
| SRR9715739 | Root | 2.022 |
| SRR9715742 | Root | 11.272 |
| SRR9715743 | Root | 10.909 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 49.187 |
| SRR8749028 | MeJA induced 9h | 20.891 |
| SRR8749029 | MeJA induced 9h | 21.930 |
| SRR8749030 | Uninduced | 3.566 |
| SRR8749031 | Uninduced | 1.916 |
| SRR8749032 | Uninduced | 2.714 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.115 |
| SRR8400027 | Control - Root | 37.440 |