Gene detail information of Glyur002010s00046960 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36740.1 | 2.00E-40 | homeobox protein 40 |
| NR | XP_003519905.1 | 6.17E-76 | PREDICTED: homeobox-leucine zipper protein ATHB-40-like [Glycine max] |
| Swissprot | tr|O23208|ATB40_ARATH | 9.00E-60 | Homeobox-leucine zipper protein ATHB-40 |
| trEMBL | tr|K7K6N9|K7K6N9_SOYBN | 2.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G06560.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02010 | 24559 | 27193 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002010s00046960.1 | PF00046.24 | Homeobox | 33 | 86 | 9.30E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.177 |
| SRR1783600 | control | 0.178 |
| SRR1783602 | moderate drought stress | 0.509 |
| SRR1811619 | moderate drought stress | 0.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.279 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.174 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.502 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.589 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.008 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.750 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.133 |
| SRR2967015 | Control (root) | 0.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.183 |
| SRR9715740 | Leaf | 0.103 |
| SRR9715741 | Leaf | 0.507 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.923 |
| SRR9715743 | Root | 1.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.115 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.003 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.161 |
| SRR8400027 | Control - Root | 3.851 |